mysql> select -> g.species as Species, -> g.accession as Accession, -> g.genename as Gene, -> m.start as Position, -> round(m.mfe,2) as MFE, -> m.pairs as Pairs, -> round(b.mfe_mean,2) as MeanMFE, -> round(b.mfe_sd,2) as StdevMFE, -> round((m.mfe - b.mfe_mean)/b.mfe_sd,2) as zR, -> round(b.pairs_mean,2) as MeanPairs, -> round(b.pairs_sd,2) as StdevPairs, -> round((m.pairs - b.pairs_mean)/b.pairs_sd,2) as zP, -> m.slipsite as SlipperySite, -> m.sequence as StructureSequence, -> m.parsed as BasePairs, -> m.algorithm as FoldingAlgorithm -> from -> genome as g, -> mfe as m, -> boot as b -> where -> m.algorithm = "pknots" and -> m.mfe = ( select min(mfe) from mfe where accession = m.accession and start = m.start ) and -> m.mfe <= -17.30 and -> (m.mfe - b.mfe_mean)/b.mfe_sd <= -1.65 and -> g.species = "saccharomyces_cerevisiae" and -> g.id = m.genome_id and -> m.id = b.mfe_id -> group by accession,start -> \G *************************** 1. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000001 Gene: YAL001C TFC3 Position: 507 MFE: -18.10 Pairs: 20 MeanMFE: -12.27 StdevMFE: 2.54 zR: -2.30 MeanPairs: 18.98 StdevPairs: 3.34 zP: 0.31 SlipperySite: AAAAAAA StructureSequence: TTCAGCCATGACGGGGTGGATAGTAATCCCTATATTAATATTAGGGATCATTTAGCAACAATAGTTGAGGTGGT BasePairs: . . . . 1 1 1 . 1 1 1 1 . 1 . 1 1 . . . . 2 2 2 . 2 2 2 2 2 2 2 . . . . . . . . . 2 2 2 2 2 2 2 . 2 2 2 . . 1 1 . . 1 . . . . 1 1 1 1 . 1 1 1 . . . FoldingAlgorithm: pknots *************************** 2. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000002 Gene: YAL002W VPS8 Position: 2022 MFE: -18.10 Pairs: 18 MeanMFE: -9.55 StdevMFE: 2.72 zR: -3.14 MeanPairs: 16.61 StdevPairs: 3.87 zP: 0.36 SlipperySite: GGGAAAT StructureSequence: AGACAACATCAGGGTACTTGTTGCAATTTTCATTGCAACTAGTATATCAAAATATCCTCAATTTATTAAAGTGTCTAACCAAGCCCT BasePairs: 1 1 1 1 1 . . . . . . . . 2 2 2 2 2 . 2 2 2 2 2 2 2 2 . . . . 2 2 2 2 2 2 2 2 . 2 2 2 2 2 . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 1 1 1 . . . . . . . . . . . FoldingAlgorithm: pknots *************************** 3. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000002 Gene: YAL002W VPS8 Position: 2250 MFE: -19.50 Pairs: 23 MeanMFE: -9.23 StdevMFE: 2.93 zR: -3.51 MeanPairs: 15.60 StdevPairs: 4.02 zP: 1.84 SlipperySite: AAAAAAT StructureSequence: GTTCTTTTCCATATCTATAAAAGTGAAAATAAGTACGCCAGTGCGCTTTCACTTATTTTAGAAACTAAGGACAT BasePairs: 1 1 1 1 1 1 . . . . . . . 2 2 2 2 . 2 . 2 2 2 2 2 2 2 2 . . . . 3 3 3 3 . . . . 3 3 3 3 . . 2 2 2 2 2 2 2 2 . 2 . . 2 2 2 2 . . . . 1 1 1 1 1 1 . . FoldingAlgorithm: pknots *************************** 4. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000002 Gene: YAL002W VPS8 Position: 2253 MFE: -19.50 Pairs: 23 MeanMFE: -8.90 StdevMFE: 2.35 zR: -4.51 MeanPairs: 15.82 StdevPairs: 2.92 zP: 2.46 SlipperySite: AAATTTC StructureSequence: GTTCTTTTCCATATCTATAAAAGTGAAAATAAGTACGCCAGTGCGCTTTCACTTATTTTAGAAACTAAGGACAT BasePairs: 1 1 1 1 1 1 . . . . . . . 2 2 2 2 . 2 . 2 2 2 2 2 2 2 2 . . . . 3 3 3 3 . . . . 3 3 3 3 . . 2 2 2 2 2 2 2 2 . 2 . . 2 2 2 2 . . . . 1 1 1 1 1 1 . . FoldingAlgorithm: pknots *************************** 5. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000014 Gene: YAL016W TPD3 Position: 1248 MFE: -19.50 Pairs: 26 MeanMFE: -14.55 StdevMFE: 2.89 zR: -1.71 MeanPairs: 20.67 StdevPairs: 3.41 zP: 1.56 SlipperySite: TTTAAAT StructureSequence: CATTGCCAGCTTGAAGGTTGTCAATGACGTAATAGGAATTGAGCTGCTATCAGACTCTTTGTTACCTGCCATAACAGAATTAG BasePairs: 1 1 1 1 1 . 1 1 1 1 1 . . . . 1 1 1 1 1 . 1 1 1 1 1 . . 2 2 2 2 2 2 2 . . . . . 3 3 3 3 3 3 . . . . 3 3 3 . 3 3 3 . 2 2 2 2 2 2 2 4 4 4 . . . . . . 4 4 4 . . . . . . FoldingAlgorithm: pknots *************************** 6. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000015 Gene: YAL017W PSK1 Position: 2463 MFE: -20.20 Pairs: 21 MeanMFE: -14.94 StdevMFE: 2.38 zR: -2.21 MeanPairs: 20.36 StdevPairs: 3.38 zP: 0.19 SlipperySite: TTTTTTT StructureSequence: ATTCAGGCAGAGATTATGGGTGATCGTAAAAGCTTTTATACGTCGGTGGGTATTGATGGCCTTCATAGGGATGGCTGT BasePairs: . . . . . 1 1 1 . . . . . 2 2 2 2 2 2 . . . . 2 2 2 2 2 2 . . 1 1 1 . . . . . . 3 3 3 3 3 3 3 . . . . 3 3 3 3 3 3 3 4 4 4 . 4 4 . . . . . 4 4 . 4 4 4 . . . FoldingAlgorithm: pknots *************************** 7. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000016 Gene: YAL018C YAL018C Position: 735 MFE: -23.40 Pairs: 22 MeanMFE: -12.77 StdevMFE: 2.48 zR: -4.28 MeanPairs: 18.39 StdevPairs: 3.07 zP: 1.18 SlipperySite: AAATTTC StructureSequence: ACAAAGACGTGAAAATATTTATCTCCACGCTGGCCAATATGCCTCATTTGGTTTCTTGGCCGGTTTGATTGAGTC BasePairs: . . . . . 1 1 . 1 1 1 1 1 . . . . 1 1 1 1 1 . 1 1 2 2 . 2 2 2 2 2 2 2 2 2 . 2 . 2 2 2 . . . . . . 2 2 2 . 2 . 2 2 2 2 2 2 2 2 2 . 2 2 . . . . . . . . FoldingAlgorithm: pknots *************************** 8. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000017 Gene: YAL019W FUN30 Position: 1614 MFE: -19.40 Pairs: 23 MeanMFE: -14.48 StdevMFE: 2.78 zR: -1.77 MeanPairs: 17.91 StdevPairs: 3.47 zP: 1.47 SlipperySite: AAAAAAC StructureSequence: ACACGTGATCTCCACCACGAGCAGAAATGGCCGTAAACCTATTGTCAAGTTCTTCAAGGGCAAACCCAGACTGTTAAGCCCGGAAA BasePairs: . . . 1 1 1 1 . . . . . . . . 1 1 1 1 . 2 . 2 2 2 2 . 2 2 2 2 . 2 2 2 . . . . 2 2 2 . 2 2 2 2 . . 2 2 2 2 . 2 . . 3 3 3 3 . 3 3 3 . . . . . . . 3 3 3 . . 3 3 3 3 . . . . . FoldingAlgorithm: pknots *************************** 9. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000022 Gene: YAL024C LTE1 Position: 462 MFE: -19.10 Pairs: 22 MeanMFE: -12.77 StdevMFE: 2.70 zR: -2.35 MeanPairs: 20.31 StdevPairs: 2.96 zP: 0.57 SlipperySite: AAAAAAC StructureSequence: GGGTGCATTGTTCTAAGTTGGTTTGGGAGAATATTGAACTAAATGAACCTGATAAATTAGACTTTGATGCATGGCTGCA BasePairs: . . 1 1 1 1 1 1 1 1 . 1 1 1 1 1 . 1 . 1 1 1 1 1 1 . . 1 1 . . . . . . . . . 1 1 . . . 1 1 1 1 1 1 . . . . 1 . . 1 1 1 1 1 . . . 1 1 1 1 1 1 1 1 . . . . . . . FoldingAlgorithm: pknots *************************** 10. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000022 Gene: YAL024C LTE1 Position: 2280 MFE: -18.50 Pairs: 22 MeanMFE: -12.62 StdevMFE: 2.62 zR: -2.25 MeanPairs: 17.53 StdevPairs: 2.99 zP: 1.50 SlipperySite: AAAAAAA StructureSequence: TCTTGCAATCACAAGATCAAACAAGCAGTTGTAAGACCGGCTAGTGGAAGGATCAGCATTTCAAGAGTTCAAAGCATTG BasePairs: 1 1 1 1 1 . 1 1 1 . . . . . 2 2 2 2 . . 3 3 . 3 3 3 . 3 3 3 . . . . 3 3 3 . . 3 3 3 . 3 3 . . . . . 2 2 2 2 . . . 1 1 1 . 1 1 1 1 1 4 4 . . . . . 4 4 . . . . FoldingAlgorithm: pknots *************************** 11. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000023 Gene: YAL025C MAK16 Position: 75 MFE: -20.60 Pairs: 22 MeanMFE: -14.77 StdevMFE: 2.99 zR: -1.95 MeanPairs: 19.25 StdevPairs: 3.23 zP: 0.85 SlipperySite: AAATTTT StructureSequence: AGAAATGAGTATAACGTCACTGGGTTGTGTACAAGGCAATCATGCCCACTTGCCAACTCCAAGTATGCAACAGTGAAGTGTGA BasePairs: . . . . . . . . . 1 1 1 1 . . . 1 1 1 1 . . . 1 1 1 1 1 1 1 1 1 . . 2 2 2 2 2 . . . . . . . . . . 2 2 2 2 2 . . . . . . . . 1 1 1 1 1 1 1 1 1 . 1 1 1 1 . . 1 1 1 1 . FoldingAlgorithm: pknots *************************** 12. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000024 Gene: YAL026C DRS2 Position: 687 MFE: -18.90 Pairs: 26 MeanMFE: -11.95 StdevMFE: 2.51 zR: -2.77 MeanPairs: 17.59 StdevPairs: 3.55 zP: 2.37 SlipperySite: TTTTTTA StructureSequence: TACATCTGCCATTCAACAGGTGCCTCACGTCTCGCCAACTAATAGATACACCACAATTGGTACTTTATTAGTGGTTTTGATTG BasePairs: . . 1 1 1 1 1 1 . . . . . . . . 1 1 1 1 1 1 . 2 . . . . 2 2 2 . . 3 3 3 3 . 3 3 3 3 3 3 3 3 . . . 3 3 3 3 . . . . 3 3 3 3 . . 3 3 3 3 3 3 3 3 3 3 3 3 . . . 2 2 2 . 2 FoldingAlgorithm: pknots *************************** 13. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000027 Gene: YAL029C MYO4 Position: 3690 MFE: -19.70 Pairs: 25 MeanMFE: -14.91 StdevMFE: 2.78 zR: -1.73 MeanPairs: 22.34 StdevPairs: 3.23 zP: 0.82 SlipperySite: TTTAAAA StructureSequence: TTCGACAAGATTTATTCCACTTGGTTAGTGAAATTCATGAAGCATGCTTCAGCCCACATCGAGATCTTCGATATGGTTTTAAACGAGAAG BasePairs: 1 1 1 1 . 2 2 2 2 . . . . . . . . . . 2 2 2 2 . . . . . 1 1 1 1 . . . . . 3 3 3 3 3 . . . . 3 3 3 3 3 . . 4 4 4 . 4 4 4 4 4 . . . . . 4 4 4 4 4 . 4 4 4 5 5 5 5 . . . . . 5 5 5 5 . FoldingAlgorithm: pknots *************************** 14. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000054 Gene: YAL058W CNE1 Position: 135 MFE: -19.80 Pairs: 21 MeanMFE: -14.67 StdevMFE: 2.71 zR: -1.90 MeanPairs: 18.77 StdevPairs: 2.95 zP: 0.76 SlipperySite: TTTAAAC StructureSequence: AGAGTGGATCACAAGTGAAGCCGTCAACAATGAAGGCTCTAAAATATATGGTGCACAATGGCGACTATCACAGGGTCGATTG BasePairs: . . . 1 1 1 . 1 1 1 1 . . . . 2 2 . 2 2 2 2 . 2 2 2 . . . . 2 2 2 . 2 2 2 2 . 2 2 . . . . . . . 1 1 1 1 . 1 1 1 . . . . . 3 3 3 3 3 . . . . . . . 3 3 3 3 3 . . . . FoldingAlgorithm: pknots *************************** 15. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000055 Gene: YAL059W ECM1 Position: 456 MFE: -20.30 Pairs: 20 MeanMFE: -11.71 StdevMFE: 2.50 zR: -3.43 MeanPairs: 16.07 StdevPairs: 2.99 zP: 1.31 SlipperySite: AAAAAAA StructureSequence: AGCTGGCTTTTTTGAACGGAGGGTTGTCTGTGCAGGCAAAAAGTGCTAGTGAAGGTAATGCTGAAAAGGAAGATGAGG BasePairs: . 1 1 1 1 1 1 1 1 1 1 1 1 1 . 2 2 2 2 2 . . . . . . 2 2 2 2 2 . . . . . 1 1 1 1 1 1 1 . 1 1 1 1 1 1 . . . . . . . . . . 3 3 . . . . 3 3 . . . . . . . . . . FoldingAlgorithm: pknots *************************** 16. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000058 Gene: YAL062W GDH3 Position: 1275 MFE: -25.90 Pairs: 25 MeanMFE: -19.48 StdevMFE: 3.21 zR: -2.00 MeanPairs: 20.49 StdevPairs: 2.42 zP: 1.86 SlipperySite: AAAAAAT StructureSequence: AAACACCTTGCCATCATTGGTCAAGGGGGCCAACATTGCCAGCTTCGTCATGGTGGCTGACGCAATGCTTGACCAGGGAGA BasePairs: . . . . . 1 1 1 1 1 1 1 1 . . . . 1 1 1 . 1 1 1 1 1 . 2 2 . 2 2 2 2 2 2 2 2 2 2 2 2 2 2 . 2 . . . . . . 2 . 2 2 2 2 2 . . 2 2 2 2 2 2 . 2 2 2 . 2 2 . . . . . . . FoldingAlgorithm: pknots *************************** 17. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000064 Gene: YAR003W SWD1 Position: 75 MFE: -24.30 Pairs: 23 MeanMFE: -17.88 StdevMFE: 2.97 zR: -2.16 MeanPairs: 22.60 StdevPairs: 3.36 zP: 0.12 SlipperySite: CCCTTTA StructureSequence: CACTGAATGTCTCCAGTTCAGTCCTTGCGGTGATTACCTGGCTCTTGGGTGTGCCAATGGAGCACTTGTTATTTACGATATGGATAC BasePairs: . 1 1 1 1 1 1 1 . . . . . . . 1 1 1 1 1 1 1 2 2 . . . 3 3 . . 3 3 3 . 3 3 . . . 4 4 4 4 4 . 4 4 . . . . . 4 4 . . . 4 4 4 4 4 . . . . 3 3 . 3 3 3 . . 3 3 . . . . 2 2 . . . . FoldingAlgorithm: pknots *************************** 18. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000072 Gene: YAR019C CDC15 Position: 2679 MFE: -27.10 Pairs: 28 MeanMFE: -16.14 StdevMFE: 3.15 zR: -3.49 MeanPairs: 22.14 StdevPairs: 3.29 zP: 1.78 SlipperySite: TTTAAAC StructureSequence: AACTGGAACAACGGATGTCCAAAAAGGAATTCAAATCAAGTTGGGGGGGACTCAGTTTTGATCTGTCAGCTATGTGAGGATATCCGTT BasePairs: . . . . . . . . . 1 1 1 1 1 1 1 1 1 1 1 . . . 2 2 . . . . 2 2 3 3 . 3 3 3 3 3 3 . 3 3 3 3 . . . . . 3 3 3 3 . . 3 3 3 3 3 3 . 3 3 4 4 4 . . . . . . 4 4 4 1 1 1 1 1 1 1 1 1 1 1 FoldingAlgorithm: pknots *************************** 19. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000074 Gene: YAR023C YAR023C Position: 339 MFE: -20.88 Pairs: 27 MeanMFE: -15.70 StdevMFE: 2.84 zR: -1.83 MeanPairs: 20.52 StdevPairs: 3.07 zP: 2.11 SlipperySite: GGGAAAA StructureSequence: TCCTGATGTACAGTGGGATACAGCGAATACACAGCCGTTCATCAGTGTTCCAGAAAATCAGGCTGCAACTCAAAATTCTGATGTTG BasePairs: . . 1 1 1 . . . . . 1 1 1 2 2 2 2 2 2 2 2 . . . 2 2 . . 3 3 . 4 4 4 4 4 3 3 . . . 2 2 . 2 2 2 2 2 2 2 2 . . . . . . . . 4 4 4 4 4 5 5 5 5 5 5 5 . . . . . . 5 5 5 . 5 5 5 5 FoldingAlgorithm: pknots *************************** 20. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000086 Gene: YAR060C YAR060C Position: 78 MFE: -17.40 Pairs: 23 MeanMFE: -8.87 StdevMFE: 2.67 zR: -3.20 MeanPairs: 16.55 StdevPairs: 3.56 zP: 1.81 SlipperySite: AAATTTT StructureSequence: AATGCAAAATAAGCTTTTTTCTTGGAAAATAAGATTTTCGGCAATAAAAGGTAAATGCAGCCAAAAATCAAAATACTTCAGAAGAAGT BasePairs: . . . 1 1 . . . . . . . 1 1 . 2 2 2 2 2 . . . . 2 2 2 2 2 . . . 3 3 3 3 3 3 . 3 3 3 . . . . . . . . 4 4 . . . . 4 4 . 3 3 3 . 3 3 3 3 3 3 . . . . . 5 5 5 5 5 . . . . 5 5 5 5 5 FoldingAlgorithm: pknots *************************** 21. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000086 Gene: YAR060C YAR060C Position: 81 MFE: -17.40 Pairs: 23 MeanMFE: -9.40 StdevMFE: 2.40 zR: -3.34 MeanPairs: 16.34 StdevPairs: 3.26 zP: 2.04 SlipperySite: TTTTTTA StructureSequence: AATGCAAAATAAGCTTTTTTCTTGGAAAATAAGATTTTCGGCAATAAAAGGTAAATGCAGCCAAAAATCAAAATACTTCAGAAGAAGT BasePairs: . . . 1 1 . . . . . . . 1 1 . 2 2 2 2 2 . . . . 2 2 2 2 2 . . . 3 3 3 3 3 3 . 3 3 3 . . . . . . . . 4 4 . . . . 4 4 . 3 3 3 . 3 3 3 3 3 3 . . . . . 5 5 5 5 5 . . . . 5 5 5 5 5 FoldingAlgorithm: pknots *************************** 22. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000086 Gene: YAR060C YAR060C Position: 84 MFE: -17.40 Pairs: 23 MeanMFE: -9.54 StdevMFE: 2.40 zR: -3.27 MeanPairs: 16.58 StdevPairs: 3.16 zP: 2.03 SlipperySite: TTTAAAC StructureSequence: AATGCAAAATAAGCTTTTTTCTTGGAAAATAAGATTTTCGGCAATAAAAGGTAAATGCAGCCAAAAATCAAAATACTTCAGAAGAAGT BasePairs: . . . 1 1 . . . . . . . 1 1 . 2 2 2 2 2 . . . . 2 2 2 2 2 . . . 3 3 3 3 3 3 . 3 3 3 . . . . . . . . 4 4 . . . . 4 4 . 3 3 3 . 3 3 3 3 3 3 . . . . . 5 5 5 5 5 . . . . 5 5 5 5 5 FoldingAlgorithm: pknots *************************** 23. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000095 Gene: YAR073W IMD1 Position: 201 MFE: -21.70 Pairs: 23 MeanMFE: -14.55 StdevMFE: 2.73 zR: -2.62 MeanPairs: 19.50 StdevPairs: 2.78 zP: 1.26 SlipperySite: TTTAAAC StructureSequence: CATTAGTATCCTCTCCAATGGACACTGTGACGGAATCTGAAATGGCCACTTTTATGGCTCTGTTGGATGGTATCGG BasePairs: 1 . . 1 1 1 1 . 1 1 1 . . . . . . . . 1 1 1 . 1 1 1 1 . 1 . 2 2 2 . 2 2 2 2 2 2 . 2 . 2 2 2 2 2 . . . . . . 2 2 2 2 2 . 2 . 2 2 2 2 2 2 . . . . 2 2 2 . FoldingAlgorithm: pknots *************************** 24. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000100 Gene: YBL004W UTP20 Position: 591 MFE: -24.50 Pairs: 25 MeanMFE: -15.38 StdevMFE: 2.99 zR: -3.04 MeanPairs: 22.54 StdevPairs: 3.32 zP: 0.74 SlipperySite: TTTTTTA StructureSequence: GAAAGTGTCCTGTTTCTAACTTGCGCGAGTTTGTTAGATCAGTTTTTGAAAAGTTAGAGGGAGATGATGAGCAAACTAACCTCTACG BasePairs: 1 1 . . . . . 1 1 2 2 2 . . 2 2 2 2 2 2 . . 2 2 . . . . 2 2 . . 2 2 2 2 2 2 . 2 2 2 . . . 3 3 . . . . 3 3 . 4 4 4 4 4 4 . 4 4 . 4 4 . . . . . 4 4 . . 4 4 . . 4 4 4 4 4 4 . . FoldingAlgorithm: pknots *************************** 25. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000100 Gene: YBL004W UTP20 Position: 2709 MFE: -23.10 Pairs: 21 MeanMFE: -12.93 StdevMFE: 2.66 zR: -3.82 MeanPairs: 17.51 StdevPairs: 2.71 zP: 1.29 SlipperySite: TTTTTTA StructureSequence: AAATGGGTCGCAGTCTATCAAGGCTGAGGACGAAAAGGTAGTCATGCCTTATGTCCTTAGAATTTTCTTCG BasePairs: . . . . . . . . . . 1 1 1 1 1 1 . . . . 1 1 1 1 1 1 2 2 2 2 2 2 . . 2 2 2 2 2 2 . . . . 2 2 2 2 2 2 . 2 2 2 2 2 2 . 3 3 3 . . . . 3 3 3 . . . FoldingAlgorithm: pknots *************************** 26. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000100 Gene: YBL004W UTP20 Position: 3039 MFE: -22.20 Pairs: 28 MeanMFE: -16.07 StdevMFE: 3.11 zR: -1.97 MeanPairs: 23.22 StdevPairs: 3.14 zP: 1.52 SlipperySite: AAATTTT StructureSequence: TTTGCATACTAATTCAGTGCTGCAGCCGTTGATCTATTCAATTGCTATGGCATACTATGTCTTAGATACTGAGAGCACAGAGGAGGTA BasePairs: . . . 1 1 . . . . . . . 2 2 2 . 3 3 3 3 3 3 . 3 3 3 . 3 3 3 3 3 . . . . . 3 3 3 3 3 . 3 3 3 . 3 3 3 3 3 3 . 4 4 . 4 4 4 4 4 4 4 . . . . . 4 4 4 4 4 . 4 4 . 4 4 . 2 2 2 . 1 1 . FoldingAlgorithm: pknots *************************** 27. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000100 Gene: YBL004W UTP20 Position: 5679 MFE: -19.60 Pairs: 26 MeanMFE: -12.28 StdevMFE: 2.41 zR: -3.04 MeanPairs: 21.41 StdevPairs: 3.70 zP: 1.24 SlipperySite: GGGTTTT StructureSequence: TTTTGAGAGATTCGTTACTTTCGGAAAATGAAGGTGTGGTAATTAGTACTTTACGTATCCTGATTACATTAATTAGGCTAGAT BasePairs: 1 1 1 1 1 1 1 1 1 . . . . . . . . 1 1 1 1 1 1 1 1 1 . 2 2 2 . . . 2 2 2 . 2 2 2 2 . . . . . 2 2 2 2 . 2 2 2 . 2 2 2 3 3 3 3 3 3 3 . . . . . 3 3 3 3 3 3 3 . . . . . . FoldingAlgorithm: pknots *************************** 28. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000101 Gene: YBL005W PDR3 Position: 771 MFE: -19.80 Pairs: 27 MeanMFE: -10.64 StdevMFE: 2.35 zR: -3.90 MeanPairs: 20.55 StdevPairs: 3.39 zP: 1.90 SlipperySite: AAAAAAT StructureSequence: GAAAACACGGGTTCATCGATGTTAATAGATACAAAGGAAACTATTTATCTAATATTAAGATTGTTTGATTTGTGTTATGAACAT BasePairs: . . . 1 1 1 1 1 1 1 . . 1 1 1 . 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 . 1 . 1 1 . . . . 1 1 . 1 . 1 1 1 1 1 1 . . . 1 1 1 1 . 1 1 1 1 . . 1 1 1 . 1 1 1 1 1 1 1 . . . . . . . . FoldingAlgorithm: pknots *************************** 29. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000103 Gene: YBL007C SLA1 Position: 1482 MFE: -20.10 Pairs: 22 MeanMFE: -11.49 StdevMFE: 2.36 zR: -3.65 MeanPairs: 17.51 StdevPairs: 2.90 zP: 1.55 SlipperySite: AAAAAAA StructureSequence: TATGGGTTGATAGAAGTGGTACTTTCAAAGTGGATGCAGAATTCATTGGATGTGCTAAGGGGAAAATCCACTT BasePairs: . . 1 1 1 1 1 1 . . 1 . . . . . 2 2 2 2 2 2 . . 2 2 . . 2 2 2 2 2 2 2 . . . . . 2 2 2 2 2 2 2 . 2 2 . 2 2 2 2 2 2 . . . 1 . . . 1 1 1 1 1 1 . . . FoldingAlgorithm: pknots *************************** 30. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000106 Gene: YBL010C YBL010C Position: 528 MFE: -22.30 Pairs: 26 MeanMFE: -14.32 StdevMFE: 2.70 zR: -2.95 MeanPairs: 20.64 StdevPairs: 3.02 zP: 1.77 SlipperySite: TTTAAAA StructureSequence: TCTTCAAAAGGAAGAGGAGCGTGAGCAAGAGCAGCATATACCGCAATTGCTTATGGCAGATTTTACTAGTATGGATGAAGAATCTTT BasePairs: 1 1 1 1 1 . . . . . 1 1 1 1 1 . . . 2 2 2 2 2 2 2 2 2 2 . . 2 2 . . . . . . . . . . 2 2 . . 2 2 2 2 2 2 2 2 . 2 2 3 3 3 3 3 3 3 . 3 3 . . . . . 3 3 . . . . 3 3 3 3 3 3 3 . . FoldingAlgorithm: pknots *************************** 31. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000111 Gene: YBL015W ACH1 Position: 990 MFE: -21.10 Pairs: 24 MeanMFE: -12.31 StdevMFE: 2.94 zR: -2.99 MeanPairs: 17.44 StdevPairs: 3.20 zP: 2.05 SlipperySite: GGGTTTC StructureSequence: AGAGCCTTTGCAAACTGGGAAAATTTCAAACACAGATTGTGTTTGAGATCTCAAGTTGTCTCGAACAATCCGGA BasePairs: . . . 1 1 . . . . 1 1 . . . 2 2 2 2 3 3 . . 3 3 3 3 3 3 3 3 3 3 3 . . . . . 3 3 3 3 3 3 3 3 3 3 3 . 3 3 . . 4 4 4 4 4 . . . . . 4 4 4 4 4 2 2 2 2 . FoldingAlgorithm: pknots *************************** 32. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000111 Gene: YBL015W ACH1 Position: 1020 MFE: -25.50 Pairs: 25 MeanMFE: -15.56 StdevMFE: 2.78 zR: -3.57 MeanPairs: 20.63 StdevPairs: 3.01 zP: 1.45 SlipperySite: AAATTTC StructureSequence: AGATTGTGTTTGAGATCTCAAGTTGTCTCGAACAATCCGGAAATGATCCGTAGATTGGGTGTCATCGCCATGAATACCCCAG BasePairs: . 1 1 1 1 1 1 . . . 1 1 1 1 1 1 . . . . . . . . 1 1 1 1 1 1 . 1 1 1 1 1 1 2 2 2 2 . . . . . 2 2 2 2 . . . . . . 3 3 3 3 3 3 3 3 3 . . . . 3 3 3 . 3 3 3 3 3 3 . . . FoldingAlgorithm: pknots *************************** 33. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000120 Gene: YBL024W NCL1 Position: 72 MFE: -17.50 Pairs: 24 MeanMFE: -10.53 StdevMFE: 2.55 zR: -2.73 MeanPairs: 16.87 StdevPairs: 3.31 zP: 2.15 SlipperySite: AAAAAAC StructureSequence: TGGTCTGAACTGGTAAAGGAAAATGAAAAATGGGAAAAATACTATAAGACTTTAGCTCTTTTCCCAGAAGATCAATGG BasePairs: 1 1 1 1 1 1 . . . 1 1 1 1 . 1 1 1 1 1 1 . . . 1 1 1 1 . . 2 2 2 2 . . . . . . . . 2 2 2 2 . . . . . 1 1 1 1 . . 1 1 1 1 1 1 . 1 1 1 1 . 1 1 1 1 1 1 . . . . FoldingAlgorithm: pknots *************************** 34. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000120 Gene: YBL024W NCL1 Position: 744 MFE: -21.60 Pairs: 28 MeanMFE: -16.05 StdevMFE: 2.94 zR: -1.89 MeanPairs: 21.25 StdevPairs: 3.20 zP: 2.11 SlipperySite: TTTAAAA StructureSequence: ACAGAATCCTGTGTGACGTTCCATGTTCTGGTGATGGTACCATGAGGAAAAATGTTAATGTTTGGAAAGACTGGAACACACAAGCAGGT BasePairs: . . . . . . . 1 1 1 1 1 1 1 1 . . 1 1 1 1 1 1 . . 2 2 . 2 2 2 2 2 . . . . 2 2 2 2 2 . 2 2 3 . 3 3 . . . . . 3 3 . . 3 4 4 4 4 . . . . 4 4 4 4 1 1 1 1 1 1 . 1 1 1 . . 1 1 1 1 1 . FoldingAlgorithm: pknots *************************** 35. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000130 Gene: YBL034C STU1 Position: 2118 MFE: -17.80 Pairs: 24 MeanMFE: -10.64 StdevMFE: 2.58 zR: -2.78 MeanPairs: 18.20 StdevPairs: 3.75 zP: 1.55 SlipperySite: AAATTTT StructureSequence: GATGACTTTCCGTCAAACCAAATCGACTTGACTGATGAGTTATCAAATAGTTACTCTAACCCGTTGATAAAGAAATATATGGATAAAA BasePairs: 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 . . . . . . . . . . . 1 1 1 1 1 . 1 1 . 1 1 1 1 1 1 1 1 . . . . . 2 2 2 . . . . . 2 2 2 3 3 3 3 . . 3 3 . . . . . . 3 3 . . 3 3 3 3 . . . . . . FoldingAlgorithm: pknots *************************** 36. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000131 Gene: YBL035C POL12 Position: 339 MFE: -17.50 Pairs: 23 MeanMFE: -11.99 StdevMFE: 2.87 zR: -1.92 MeanPairs: 17.78 StdevPairs: 3.09 zP: 1.69 SlipperySite: TTTAAAA StructureSequence: GAAAGTTACATGGTCCCTTTTCACTCAGTGATTCCAAGCAAACATATAATGTAGGCTCTGAGGCAGAAACAAATGAAAAAGGAAATAG BasePairs: . . . . . . . . . . 1 1 . 1 1 1 . 1 1 1 1 1 . 2 2 2 2 2 3 3 . . . . 3 3 4 4 4 . . 4 4 4 . . . . . 4 4 4 . . 4 4 4 2 2 2 2 2 . . . . . . . . . . . . 1 1 1 1 1 . 1 1 1 . . 1 1 . FoldingAlgorithm: pknots *************************** 37. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000131 Gene: YBL035C POL12 Position: 342 MFE: -17.50 Pairs: 23 MeanMFE: -12.36 StdevMFE: 2.89 zR: -1.78 MeanPairs: 17.88 StdevPairs: 3.48 zP: 1.47 SlipperySite: AAAAAAA StructureSequence: GAAAGTTACATGGTCCCTTTTCACTCAGTGATTCCAAGCAAACATATAATGTAGGCTCTGAGGCAGAAACAAATGAAAAAGGAAATAG BasePairs: . . . . . . . . . . 1 1 . 1 1 1 . 1 1 1 1 1 . 2 2 2 2 2 3 3 . . . . 3 3 4 4 4 . . 4 4 4 . . . . . 4 4 4 . . 4 4 4 2 2 2 2 2 . . . . . . . . . . . . 1 1 1 1 1 . 1 1 1 . . 1 1 . FoldingAlgorithm: pknots *************************** 38. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000135 Gene: YBL039C URA7 Position: 519 MFE: -17.70 Pairs: 21 MeanMFE: -12.34 StdevMFE: 2.54 zR: -2.11 MeanPairs: 16.65 StdevPairs: 3.10 zP: 1.40 SlipperySite: AAATTTT StructureSequence: GATACACGTTTCTCTAGTTCCTGTCATCCACGGTGAACAAAAAACTAAGCCAACTCAAGCTGCCATCAAAGGTTTGAGG BasePairs: . . . . . . . 1 1 1 1 . 1 . . . 1 1 1 1 1 1 1 1 . . . . . 1 1 1 1 . 1 1 1 1 . 1 . 1 1 1 1 . . . . . . . . 2 2 2 2 2 2 2 2 . . . . . . . . . 2 2 2 2 2 2 2 2 . FoldingAlgorithm: pknots *************************** 39. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000135 Gene: YBL039C URA7 Position: 1305 MFE: -25.10 Pairs: 26 MeanMFE: -15.23 StdevMFE: 3.00 zR: -3.29 MeanPairs: 21.53 StdevPairs: 3.11 zP: 1.44 SlipperySite: AAAAAAT StructureSequence: GTTGTCGTTTTCATGCCTGAAATTGACAAGGAAACCATGGGGGGCTCAATGAGATTAGGTTTGAGACCAACATTTTTCCAAAATGA BasePairs: . 1 1 1 1 1 1 . 1 1 1 1 1 . . . . 1 1 1 1 1 . 1 1 1 1 1 1 2 2 2 2 2 . . 2 2 2 . 2 2 . . 2 2 2 2 2 . . . . . . . . . . . 2 2 2 2 2 . 2 2 . . 2 2 2 . 2 2 2 2 2 . . . . . . . FoldingAlgorithm: pknots *************************** 40. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000135 Gene: YBL039C URA7 Position: 1650 MFE: -20.30 Pairs: 18 MeanMFE: -14.52 StdevMFE: 2.61 zR: -2.21 MeanPairs: 19.71 StdevPairs: 2.92 zP: -0.59 SlipperySite: GGGTTTA StructureSequence: TGCTGCTTCCGCTGGTATCCTTCAAGATGTCATTGAAGGTAAGTACGATCTTGAGGCCGGCGAAAACAAATTCAACTTTTAA BasePairs: . . . 1 1 . 1 1 . 1 1 1 1 1 1 1 . . 2 2 2 2 2 2 2 . . . . . . . 2 2 2 2 2 2 2 . . . . . . . . . . . . . . . . 1 1 1 1 1 1 1 . 1 1 . 1 1 . . . . . . . . . . . . . . FoldingAlgorithm: pknots *************************** 41. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000138 Gene: YBL042C FUI1 Position: 150 MFE: -21.10 Pairs: 27 MeanMFE: -14.10 StdevMFE: 2.85 zR: -2.46 MeanPairs: 20.43 StdevPairs: 3.13 zP: 2.10 SlipperySite: AAAAAAA StructureSequence: TACCGATTCAGAAAACAATATAACCATTGCTCAGGATGACGAAAAGGTGTCTTGGCTGCAAAGAGTTGTCGAGTTTTTTGAG BasePairs: . . . . . . . 1 1 1 1 1 1 1 1 1 . . . 2 2 2 2 2 2 . 2 2 2 2 . 2 2 2 2 2 2 2 . 2 . . . . . 2 . 2 2 2 2 2 2 2 . . . 2 2 2 2 . 2 . 2 2 2 2 2 . . . 1 1 1 1 1 1 1 1 1 . FoldingAlgorithm: pknots *************************** 42. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000146 Gene: YBL050W SEC17 Position: 57 MFE: -22.40 Pairs: 26 MeanMFE: -14.97 StdevMFE: 2.69 zR: -2.76 MeanPairs: 21.06 StdevPairs: 3.18 zP: 1.55 SlipperySite: GGGTTTC StructureSequence: GAAATTGTTTAGCGGTTCTGATTCATACAAGTTTGAGGAGGCTGCTGATCTTTGTGTCCAAGCAGCCACCATTTACCGTCTAA BasePairs: . . . . . . . . 1 1 1 1 1 1 1 1 . . . 1 1 1 2 2 2 . . . . . . . . 2 2 2 3 3 . 3 3 3 3 3 3 3 3 3 3 . . . . . . 3 3 3 . . 3 3 3 3 3 3 3 . 3 3 1 1 1 . 1 1 1 1 . 1 1 1 1 FoldingAlgorithm: pknots *************************** 43. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000148 Gene: YBL052C SAS3 Position: 1962 MFE: -17.60 Pairs: 24 MeanMFE: -9.73 StdevMFE: 2.58 zR: -3.05 MeanPairs: 17.42 StdevPairs: 3.60 zP: 1.83 SlipperySite: TTTTTTT StructureSequence: TGTTTCCTCCTTAACAGAGTATATGTGTGATTATAAGAACACAAATAATGATAGATTAATCTATCAAGCGGAAAAAAGAG BasePairs: . . 1 1 1 1 1 . 1 2 2 2 . . . . 2 2 2 3 3 3 . 3 3 3 3 3 . . . . . . . . . . 3 3 3 3 3 . 3 3 3 . 4 4 4 4 4 4 4 . . . . 4 4 4 4 4 4 4 . 1 . 1 1 1 1 1 . . . . . . FoldingAlgorithm: pknots *************************** 44. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000157 Gene: YBL061C SKT5 Position: 996 MFE: -21.60 Pairs: 18 MeanMFE: -15.18 StdevMFE: 2.88 zR: -2.23 MeanPairs: 19.45 StdevPairs: 3.22 zP: -0.45 SlipperySite: TTTTTTA StructureSequence: TGCGGCTAGCAGGAATCATCCCTCAGCAATGTATAAATTGGGACTTTATTCATTCTACGGCAGAATGGGTCTTCCAACCG BasePairs: 1 1 1 . . . . . 1 1 1 . . . . . . . 2 2 2 2 . 3 3 . . . . 3 3 . . . . . . . . 2 2 2 2 . . . . . . . 4 4 4 4 4 4 . . . . . 4 4 4 4 4 4 5 5 5 . . . . . . 5 5 5 . FoldingAlgorithm: pknots *************************** 45. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000164 Gene: YBL068W PRS4 Position: 573 MFE: -21.20 Pairs: 27 MeanMFE: -16.11 StdevMFE: 2.96 zR: -1.72 MeanPairs: 21.18 StdevPairs: 3.04 zP: 1.91 SlipperySite: TTTAAAT StructureSequence: TTAGAGCCCGGAAAACAGATTTCGACAATGCTATTTTGGTGTCGCCTGATGCAGGTGGTGCTAAGAGAGTAGCTGCTTT BasePairs: . . . 1 1 1 1 . 2 2 2 2 2 . . . . . . 2 2 2 2 2 . . . . 3 3 3 3 . 3 3 3 3 3 3 3 3 3 3 3 3 3 3 . . . . . 3 3 3 3 3 3 3 3 3 3 3 3 3 3 . 3 3 3 3 . . . 1 1 1 1 . FoldingAlgorithm: pknots *************************** 46. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000164 Gene: YBL068W PRS4 Position: 678 MFE: -20.10 Pairs: 23 MeanMFE: -12.11 StdevMFE: 2.79 zR: -2.87 MeanPairs: 19.57 StdevPairs: 3.09 zP: 1.11 SlipperySite: TTTAAAT StructureSequence: TTTGCTTTGATTCACAAAGAGAGGCAAAAAGCTAACGAGGTTTCAAAAATGGTGCTTGTTGGTGATGTTACCAATAAATCA BasePairs: 1 1 1 1 1 1 1 1 . . . . . . . . . . . . 1 1 1 1 1 1 1 1 . . 2 2 2 2 2 2 2 2 2 . . . 2 2 2 . . . . 2 2 2 . . 2 2 2 2 2 2 2 2 2 3 3 3 . . . . . . . . . . . 3 3 3 . FoldingAlgorithm: pknots *************************** 47. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000164 Gene: YBL068W PRS4 Position: 681 MFE: -18.10 Pairs: 29 MeanMFE: -12.03 StdevMFE: 2.55 zR: -2.38 MeanPairs: 20.56 StdevPairs: 3.04 zP: 2.78 SlipperySite: AAATTTT StructureSequence: TTTGATTCACAAAGAGAGGCAAAAAGCTAACGAGGTTTCAAAAATGGTGCTTGTTGGTGATGTTACCAATAAATCATGTTTATT BasePairs: 1 1 1 1 . 1 1 1 . . . . . 1 1 1 . . . 1 1 1 1 2 2 2 2 2 . . . . . 2 2 2 2 2 . 3 3 3 . 3 3 3 3 3 . . 3 3 3 3 3 3 3 3 3 . . . . 3 3 3 3 3 3 3 3 3 3 3 3 3 3 . 3 3 3 . . . FoldingAlgorithm: pknots *************************** 48. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000170 Gene: YBL074C AAR2 Position: 525 MFE: -19.50 Pairs: 25 MeanMFE: -12.09 StdevMFE: 2.45 zR: -3.02 MeanPairs: 18.58 StdevPairs: 2.82 zP: 2.27 SlipperySite: TTTAAAC StructureSequence: ATACAGTAATAAACTTCAAATCTAGAGAAGCCATAAGGCCTGGCCATGAAATGGAGGATTTTTTAGACAAGTCTTACTACTTG BasePairs: . . . . 1 1 1 . . . . . 1 1 1 . . . . . 2 2 2 2 2 2 2 2 2 3 3 3 . . . . 3 3 3 4 4 . . 4 4 4 . . . . . 4 4 4 . 4 4 . 2 2 2 2 2 2 2 2 2 5 5 5 5 5 . . . . . . 5 5 5 5 5 FoldingAlgorithm: pknots *************************** 49. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000170 Gene: YBL074C AAR2 Position: 591 MFE: -17.62 Pairs: 33 MeanMFE: -12.48 StdevMFE: 2.98 zR: -1.73 MeanPairs: 22.67 StdevPairs: 3.78 zP: 2.73 SlipperySite: TTTTTTA StructureSequence: CAAGTCTTACTACTTGAACACTGTAATGCTACAAGGAATTTTTAAAAATTCAAGTAATTATTTTGGGGAGTTGCAGTTTGCGTTCTTAAAT BasePairs: 1 1 1 1 1 . . . . . . 1 1 1 1 1 2 2 2 . 3 3 3 3 3 3 3 . 3 3 . 3 3 3 3 4 4 4 4 4 4 . . . . 4 4 4 4 4 4 5 5 . . . . 5 5 . . 3 3 3 3 . 3 3 . 3 3 3 3 3 3 3 6 6 6 6 . 2 2 2 . . 6 6 6 6 . FoldingAlgorithm: pknots *************************** 50. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000175 Gene: YBL079W NUP170 Position: 414 MFE: -17.60 Pairs: 17 MeanMFE: -12.10 StdevMFE: 2.60 zR: -2.11 MeanPairs: 18.40 StdevPairs: 3.12 zP: -0.45 SlipperySite: AAAAAAC StructureSequence: GCTTAGGAGCGTTTACTCCATTTGAAAAGCAAGATGTGTTCAACATTCCGGACGAGATTTTGCATGAATTTT BasePairs: . . . . . 1 1 1 1 . . . . . . 1 1 1 1 . . . 2 . . . . 2 3 3 3 3 3 3 3 . 3 3 3 3 3 . . . . . . . . 3 3 3 3 3 . . 3 3 3 3 3 3 3 . . . . . . . . . FoldingAlgorithm: pknots *************************** 51. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000175 Gene: YBL079W NUP170 Position: 2103 MFE: -17.60 Pairs: 20 MeanMFE: -10.89 StdevMFE: 2.31 zR: -2.90 MeanPairs: 17.25 StdevPairs: 3.27 zP: 0.84 SlipperySite: TTTTTTA StructureSequence: ATGGGTATTCCTGGCGTTGTTGACATCAAACCTGTCTACAACCGTTATTCTGTATCTACAGTATCCTCTTTATTGTCAAAGCC BasePairs: . . 1 1 1 . . . . 1 1 1 2 2 2 . . . . 2 2 2 2 2 2 . . . . . . 3 3 3 3 . 3 3 3 3 . . . . . . . . . . 3 3 3 3 . . . 3 3 3 3 . . . . . . . . . . . . 2 2 2 2 2 2 . 2 2 2 FoldingAlgorithm: pknots *************************** 52. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000175 Gene: YBL079W NUP170 Position: 3180 MFE: -19.70 Pairs: 24 MeanMFE: -12.43 StdevMFE: 2.93 zR: -2.48 MeanPairs: 21.52 StdevPairs: 3.49 zP: 0.71 SlipperySite: CCCAAAA StructureSequence: TGAATTCTTATTGAATATTGCCAACTCTATGGACAAAGGCAAACTAGCTTGTCAATATGTGGCAAATGGATTTTTAGAAAATGATG BasePairs: . . . . 1 1 1 1 . . . . 2 2 2 2 . 2 2 2 2 2 2 . . . . 3 3 3 . 3 3 3 3 . . 3 3 3 . . . . . . 3 3 3 3 3 3 3 . 3 3 3 . . 2 2 2 2 2 2 . . . . 2 2 2 2 . . 1 1 1 1 . . . . . . . FoldingAlgorithm: pknots *************************** 53. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000182 Gene: YBL086C YBL086C Position: 1044 MFE: -17.80 Pairs: 21 MeanMFE: -12.82 StdevMFE: 2.76 zR: -1.80 MeanPairs: 18.21 StdevPairs: 3.22 zP: 0.87 SlipperySite: AAATTTA StructureSequence: TTACAGGCATTGAGATTGAACGAAATGGAAGAAGAGTACTACAATCCAAATTATGGCAATAACCTTGGGAACAAGGCAAGTAGTTGG BasePairs: . . . . . . 1 1 . 2 2 2 . 2 2 2 2 2 . 2 2 . . . . 3 . . . . 3 . . . . 2 2 . . . . 2 2 2 2 2 2 2 2 . . . . . . 1 1 . . . . . 4 4 4 4 4 . . . . 4 4 4 4 4 5 5 5 . . . . 5 5 5 . FoldingAlgorithm: pknots *************************** 54. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000185 Gene: YBL089W AVT5 Position: 897 MFE: -23.70 Pairs: 23 MeanMFE: -12.18 StdevMFE: 2.70 zR: -4.27 MeanPairs: 19.67 StdevPairs: 3.82 zP: 0.87 SlipperySite: TTTTTTA StructureSequence: CATCATAATTGGTGGTACAGGTTATATGACATTTGGTGAGAATATTGTAGGAAATATCCTCACTTTATACCCGAATTCCATCTCCACCACC BasePairs: . . . . . . . . . 1 1 1 1 1 1 . . . . 2 2 . 2 2 2 2 . . . . . . . . 3 3 3 3 3 3 . 3 3 3 3 3 . . . . . . 3 3 3 3 3 . 3 3 3 3 3 3 . 2 2 2 2 . 2 2 . . . . . . . . . . . 1 1 1 1 1 1 . . FoldingAlgorithm: pknots *************************** 55. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000187 Gene: YBL091C MAP2 Position: 441 MFE: -18.70 Pairs: 21 MeanMFE: -13.75 StdevMFE: 2.63 zR: -1.88 MeanPairs: 17.30 StdevPairs: 2.70 zP: 1.37 SlipperySite: AAATTTA StructureSequence: TAGCGATGGAGGATCCCAAATCTCAAGGTATTGGGTTTCCAACGGGTCTCTCTCTCAACCATTGTGCTGC BasePairs: . . 1 1 1 1 1 1 1 . 2 2 2 . 2 2 2 2 2 2 2 2 . . . . 2 2 2 . 2 2 2 2 2 . . 2 2 2 . . . 3 3 3 . . . . . . . 3 3 3 . . 1 1 1 1 1 1 1 . . . . . FoldingAlgorithm: pknots *************************** 56. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000191 Gene: YBL095W YBL095W Position: 735 MFE: -18.30 Pairs: 18 MeanMFE: -9.81 StdevMFE: 2.29 zR: -3.71 MeanPairs: 16.95 StdevPairs: 3.26 zP: 0.32 SlipperySite: AAAAAAA StructureSequence: TTTGCCAAGGCCAATTGTATTCTCGTTGAGCCTACTTGGTTCAAATATTTTAAATGGCTTGATATGTTTTG BasePairs: . . . . . . . 1 1 1 1 1 1 . 1 1 1 . 1 1 . . . . . 2 2 2 2 2 2 2 . . . . . 2 2 2 2 2 2 2 . . 1 1 . . 1 1 1 . 1 1 1 1 1 1 . . . . . . . . . . . FoldingAlgorithm: pknots *************************** 57. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000202 Gene: YBL106C SRO77 Position: 1119 MFE: -18.70 Pairs: 24 MeanMFE: -12.00 StdevMFE: 2.66 zR: -2.52 MeanPairs: 17.96 StdevPairs: 3.65 zP: 1.65 SlipperySite: AAATTTT StructureSequence: CCCTTGCCGAAGGCTTCTCCATATTTTGGTGGATGCCATGACACAAACCTCATTTTATTACTTTTAGAAGATGGCGAACTT BasePairs: . . . 1 1 1 1 1 1 . . 2 2 2 . . . 2 2 2 2 2 . . . . . . 2 2 2 2 2 . 2 2 2 3 3 3 3 . . . . . . . . 3 3 3 3 4 4 4 . 4 4 4 . . . . 4 4 4 . 4 4 4 1 1 1 1 1 1 . . . . FoldingAlgorithm: pknots *************************** 58. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000202 Gene: YBL106C SRO77 Position: 1320 MFE: -19.80 Pairs: 23 MeanMFE: -14.15 StdevMFE: 2.83 zR: -2.00 MeanPairs: 19.32 StdevPairs: 2.88 zP: 1.28 SlipperySite: AAAAAAT StructureSequence: GCTGGGGATGATGACAATCGCTCAAAGTGAATCGTTTTTAAAAGGTGGTATTCCTGCCACCAGAAATATTAGAAGGCAT BasePairs: 1 1 1 . 1 1 1 . . 1 1 1 . . . . 1 1 1 . 1 1 1 . . 1 1 1 . . . . . 2 2 2 2 2 2 . 2 2 . 3 3 3 3 3 3 . . . . . . 3 3 3 3 3 3 . . . . . . . 2 2 . 2 2 2 2 2 2 . . FoldingAlgorithm: pknots *************************** 59. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000202 Gene: YBL106C SRO77 Position: 1368 MFE: -24.40 Pairs: 30 MeanMFE: -17.34 StdevMFE: 2.81 zR: -2.51 MeanPairs: 22.66 StdevPairs: 3.07 zP: 2.39 SlipperySite: TTTAAAA StructureSequence: GTGGTATTCCTGCCACCAGAAATATTAGAAGGCATGAGACCAGATCTGCTTTACTAACTGGGCATAGTAATGGTTCAGTCAGAATATGGG BasePairs: 1 1 1 1 1 . . . . . . 1 1 1 1 1 2 . . . . 2 2 2 2 2 . . 3 3 3 3 3 3 . 3 3 . . . . . . . 3 3 3 3 3 3 3 3 . 4 4 . 4 4 4 4 4 4 4 . 4 4 . . . . 4 4 4 4 4 4 4 4 4 . 4 4 2 2 2 2 2 . 2 . FoldingAlgorithm: pknots *************************** 60. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000206 Gene: YBR002C RER2 Position: 51 MFE: -25.50 Pairs: 23 MeanMFE: -16.89 StdevMFE: 3.64 zR: -2.36 MeanPairs: 20.25 StdevPairs: 2.98 zP: 0.92 SlipperySite: AAAAAAC StructureSequence: TTCGCGCACATTGCGTGCATCTAACTGTGTACCTAGACATGTTGGGTTCATCATGGATGGGAACAGGAGATTCGCTA BasePairs: . . 1 1 1 1 1 . . . . . 1 1 1 1 1 . 2 2 2 2 . . 2 2 2 2 . . . 2 2 2 2 . . 2 2 2 2 . 2 2 . . . . 2 2 . 2 2 2 2 . . 2 2 2 2 . 2 2 2 2 . 2 2 2 2 . . . . . . FoldingAlgorithm: pknots *************************** 61. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000210 Gene: YBR006W UGA2 Position: 807 MFE: -22.30 Pairs: 25 MeanMFE: -16.93 StdevMFE: 2.93 zR: -1.83 MeanPairs: 21.66 StdevPairs: 3.18 zP: 1.05 SlipperySite: CCCTTTC StructureSequence: TTGAGGATGCCGATTTGGATCAAGCCTTGGAACAAGCCATGGCTTGTAAATTTAGGGGTTTGGGTCAAACATGTGTGTGCGCA BasePairs: . . . . . . . 1 1 1 1 1 . 2 2 2 2 2 . 2 2 2 2 2 2 2 2 2 . . . 3 3 3 3 3 3 . . . . 3 3 3 3 3 3 . . . . . . . 2 2 2 2 2 2 2 2 2 . 2 2 2 2 2 . . . . . . . . 1 1 . 1 1 1 FoldingAlgorithm: pknots *************************** 62. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000211 Gene: YBR007C YBR007C Position: 411 MFE: -27.60 Pairs: 24 MeanMFE: -16.37 StdevMFE: 3.22 zR: -3.49 MeanPairs: 21.59 StdevPairs: 3.57 zP: 0.68 SlipperySite: TTTAAAA StructureSequence: AAAGGATTCCACTTTGAGAGGCAAATACTCTTCCGGTAAAGTGGAAAGGCATTTGCCCGTGAAGTCGAGATACTCTTATATCGTCGAA BasePairs: . . . . . . 1 1 1 1 1 1 1 1 1 1 . 2 2 2 . . . . . . . 2 2 2 . . . . . . 1 1 1 1 1 1 1 1 1 1 . 3 3 3 . . . . 3 3 3 . . . . . . . 4 4 4 4 4 4 4 4 . . . . . . 4 4 4 4 . 4 4 4 4 . FoldingAlgorithm: pknots *************************** 63. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000212 Gene: YBR008C FLR1 Position: 228 MFE: -21.81 Pairs: 30 MeanMFE: -15.92 StdevMFE: 2.93 zR: -2.01 MeanPairs: 19.78 StdevPairs: 2.97 zP: 3.44 SlipperySite: AAAAAAT StructureSequence: TTTCAGGGTGGATTGGAACGGCCCCAGTGATCCTGAGAACCCACAAAACTGGCCCCTACTGAAAAAATCATTGGTAGTATTCCAAAT BasePairs: 1 1 1 1 1 1 1 1 1 . . . 2 2 2 2 2 2 . 3 3 3 3 . . . 4 4 4 1 1 1 1 1 1 1 1 1 . . . 4 4 4 . . . 5 5 5 3 3 3 3 6 6 . . . 6 6 6 . . . . . 6 6 6 . . 6 6 . 5 5 5 . 2 2 2 2 2 2 . . FoldingAlgorithm: pknots *************************** 64. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000212 Gene: YBR008C FLR1 Position: 1245 MFE: -22.90 Pairs: 23 MeanMFE: -16.47 StdevMFE: 2.79 zR: -2.30 MeanPairs: 21.62 StdevPairs: 2.88 zP: 0.48 SlipperySite: TTTTTTA StructureSequence: CGTGGCAATGTGTGTCTGCTGGTGCCTGCCTCTGTCTTTGTTCTTATTTGGTTGGACTGCTCGAGTGCATTGGATTTTGCCAGTTATCT BasePairs: . . . 1 1 1 1 . . . . . 1 1 1 1 . 2 2 2 2 2 2 . 2 2 . 2 2 2 2 2 . 3 3 3 3 . . . . . 4 4 . . . . . 4 4 . . 3 3 3 3 . . . . . 2 2 2 . 2 2 . . . 2 2 . . . . . 2 2 2 2 2 2 . . . . . FoldingAlgorithm: pknots *************************** 65. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000212 Gene: YBR008C FLR1 Position: 1350 MFE: -17.50 Pairs: 22 MeanMFE: -10.94 StdevMFE: 2.77 zR: -2.36 MeanPairs: 17.77 StdevPairs: 3.42 zP: 1.24 SlipperySite: TTTTTTT StructureSequence: GTTTTAGCTGTCTTTAACATTTTCCAAGCAACTTTTGCATATTTGGCTACATGCTACCCAAAGTATGTTGCATCCGTTTTTGCAG BasePairs: 1 1 1 1 . 1 1 . 1 1 1 . . . . . 1 1 1 . 1 1 . . . 1 1 1 1 . . . . . . 2 2 2 2 . . . . . . 3 3 . 3 3 3 3 3 3 3 . . . . . . 3 3 3 3 3 3 3 . 3 3 . . . . . . . . . 2 2 2 2 . FoldingAlgorithm: pknots *************************** 66. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000224 Gene: YBR020W GAL1 Position: 588 MFE: -21.80 Pairs: 24 MeanMFE: -15.95 StdevMFE: 3.03 zR: -1.93 MeanPairs: 20.97 StdevPairs: 2.88 zP: 1.05 SlipperySite: AAATTTA StructureSequence: TATTACGGTCGTTGCAGAACATTATGTTGGTGTTAACAATGGCGGTATGGATCAGGCTGCCTCTGTTTGCGGTGAGG BasePairs: . . . . . . . . 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 . . . . . 2 2 2 2 2 2 . 3 3 3 . . 3 3 3 3 3 3 . . . . . . . . . 3 3 3 3 3 3 . . 3 3 3 1 1 1 1 1 1 1 1 1 . . FoldingAlgorithm: pknots *************************** 67. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000232 Gene: YBR028C YBR028C Position: 831 MFE: -21.40 Pairs: 27 MeanMFE: -13.88 StdevMFE: 2.41 zR: -3.12 MeanPairs: 23.10 StdevPairs: 3.35 zP: 1.16 SlipperySite: TTTAAAA StructureSequence: GAAAACTGTTTATTGAATCAACGTGGACATTTAGTATTGACAGATTTTGGTCTGAGTAAAAAAAGTGCTAATGATTCCGCGGTTGATG BasePairs: 1 1 1 . . . . . 1 1 1 . . . . . 2 2 2 2 2 2 2 2 2 2 2 . . . 3 3 3 3 3 3 3 3 . . 4 4 4 4 4 . . . . 4 4 4 4 4 . . . . . . . . . 3 3 3 3 3 3 3 3 . . . . 2 2 2 2 2 . 2 2 2 2 2 2 . FoldingAlgorithm: pknots *************************** 68. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000233 Gene: YBR029C CDS1 Position: 996 MFE: -18.90 Pairs: 20 MeanMFE: -13.18 StdevMFE: 2.62 zR: -2.18 MeanPairs: 20.87 StdevPairs: 3.33 zP: -0.26 SlipperySite: TTTAAAC StructureSequence: AGCTACCTTTGCATCATTATTTGCGCCATTTGGAGGCTTTTTCGCATCTGGTCTAAAGAGAACTTTTAAAGTTAAAGACTTTGG BasePairs: . . . . 1 1 1 . . 1 1 1 . . . . . . . . . . 2 2 . 2 2 . . . . 2 2 . . 2 2 . . . . . . 1 1 1 . . . 1 1 1 3 3 3 3 3 3 . . 4 4 4 4 . . . . . 4 4 4 4 . . . . . 3 3 3 3 3 3 FoldingAlgorithm: pknots *************************** 69. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000239 Gene: YBR035C PDX3 Position: 504 MFE: -19.00 Pairs: 24 MeanMFE: -12.90 StdevMFE: 2.80 zR: -2.18 MeanPairs: 16.56 StdevPairs: 2.62 zP: 2.84 SlipperySite: AAAAAAC StructureSequence: CGAACGTTTCAAGGATGCTGAAGACATCCCATGTCCAGATTATTGGGGTGGCTTGAGAATCGTTC BasePairs: . 1 1 1 1 1 . 1 1 1 1 1 1 2 2 2 2 . . . . . . . 2 2 2 2 3 3 3 3 . 3 3 3 3 3 . . . . 3 3 3 3 3 3 3 3 3 1 1 1 1 1 1 . . . 1 1 1 1 1 FoldingAlgorithm: pknots *************************** 70. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000242 Gene: YBR038W CHS2 Position: 1470 MFE: -18.50 Pairs: 26 MeanMFE: -12.51 StdevMFE: 2.83 zR: -2.12 MeanPairs: 20.96 StdevPairs: 3.36 zP: 1.50 SlipperySite: AAATTTT StructureSequence: AATATAAGATCTCGAATATTTTAGATAAACCATTAGAAAGTGTTTTTGGTTATATCTCTGTTCTTCCTGGTGCCCTGTCCGCATATAGGT BasePairs: . . . . . 1 1 1 1 . . . 1 1 . . . . . . . . 2 2 2 2 2 2 2 2 2 2 . . 2 2 2 . . . . . 2 2 2 . 2 2 2 2 2 . 2 2 2 2 2 . 1 1 . 1 1 1 1 3 3 3 3 . 3 3 3 . . . . . . . 3 3 3 . . 3 3 3 3 . FoldingAlgorithm: pknots *************************** 71. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000248 Gene: YBR044C TCM62 Position: 27 MFE: -20.90 Pairs: 18 MeanMFE: -9.94 StdevMFE: 2.47 zR: -4.44 MeanPairs: 15.64 StdevPairs: 2.77 zP: 0.85 SlipperySite: GGGAAAT StructureSequence: TCAAACGAAATGTTCGGTAAAAACGTTACACACCCCAATCTATAGAACAAAAAACCTTCAGGTTCTCAGAGATACGCTCTCTGGTAT BasePairs: . . . . . 1 1 1 . . . . . 1 1 1 2 2 2 2 . . . . . 2 2 2 2 . . . . . . . . . . . . . . 3 3 3 3 3 . . . . . . . . . . . . . 3 3 3 3 3 4 4 4 4 4 4 . . . . . 4 4 4 4 4 4 . . . . FoldingAlgorithm: pknots *************************** 72. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000250 Gene: YBR046C ZTA1 Position: 786 MFE: -19.10 Pairs: 27 MeanMFE: -13.53 StdevMFE: 2.66 zR: -2.09 MeanPairs: 20.29 StdevPairs: 3.29 zP: 2.04 SlipperySite: CCCAAAA StructureSequence: TACTTTGGTGAGACCTCAACTTTACGGCTATATCGCCGATCCTGAAGAATGGAAATATTACTCTGACGAGTTTTTTGGTCT BasePairs: 1 1 1 . . . . 1 1 1 2 2 2 2 2 . . 2 2 3 3 3 3 3 4 4 4 4 . . . . . . 4 4 4 4 . . . . 3 3 3 3 3 5 5 5 5 . . . . 5 5 5 5 6 6 6 6 . . . . 6 6 6 6 . 2 2 . . 2 2 2 2 2 FoldingAlgorithm: pknots *************************** 73. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000250 Gene: YBR046C ZTA1 Position: 789 MFE: -19.10 Pairs: 27 MeanMFE: -13.84 StdevMFE: 2.86 zR: -1.84 MeanPairs: 20.27 StdevPairs: 3.08 zP: 2.18 SlipperySite: AAAAAAT StructureSequence: TACTTTGGTGAGACCTCAACTTTACGGCTATATCGCCGATCCTGAAGAATGGAAATATTACTCTGACGAGTTTTTTGGTCT BasePairs: 1 1 1 . . . . 1 1 1 2 2 2 2 2 . . 2 2 3 3 3 3 3 4 4 4 4 . . . . . . 4 4 4 4 . . . . 3 3 3 3 3 5 5 5 5 . . . . 5 5 5 5 6 6 6 6 . . . . 6 6 6 6 . 2 2 . . 2 2 2 2 2 FoldingAlgorithm: pknots *************************** 74. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000257 Gene: YBR053C YBR053C Position: 42 MFE: -20.30 Pairs: 21 MeanMFE: -14.99 StdevMFE: 3.07 zR: -1.73 MeanPairs: 19.53 StdevPairs: 3.28 zP: 0.45 SlipperySite: TTTAAAA StructureSequence: TATTATCACGTTCCCGGTGCCATACATAGTGAAGGAATAACCTTCGTTAAGGAAACCGGTACACTGTTGTGGGTTG BasePairs: . . . . . 1 1 1 1 1 . . . 2 2 2 2 2 . 2 2 . . . . . 2 2 2 2 2 2 2 2 2 . . . . . 2 2 2 2 2 2 2 2 2 . 2 2 . . 2 2 2 2 2 . . . . . . . . 1 1 1 1 1 . . . . FoldingAlgorithm: pknots *************************** 75. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000259 Gene: YBR055C PRP6 Position: 780 MFE: -17.86 Pairs: 24 MeanMFE: -12.75 StdevMFE: 2.33 zR: -2.19 MeanPairs: 18.45 StdevPairs: 3.38 zP: 1.64 SlipperySite: AAAAAAA StructureSequence: AATAGAAAATGGTTGCCAAGAGTGCCCTCGAAGCTCCGATATTTGGCTAGAAAACATTAGACTACACGAATCTGATGTTC BasePairs: . 1 1 1 . . . . . 1 1 1 . . 1 1 . . . 2 2 2 . 3 3 3 2 2 2 . . . 1 1 . 1 1 1 . 1 1 1 . . 3 3 3 . . . . . 4 4 4 4 4 4 4 4 4 . 4 . . . . . 4 . 4 4 4 4 4 4 4 4 4 . FoldingAlgorithm: pknots *************************** 76. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000259 Gene: YBR055C PRP6 Position: 2103 MFE: -18.68 Pairs: 27 MeanMFE: -11.28 StdevMFE: 2.60 zR: -2.85 MeanPairs: 18.42 StdevPairs: 3.51 zP: 2.45 SlipperySite: CCCTTTA StructureSequence: TGGGTTTCCCTATCAAAGATTGACGAGATTGATCTAAAAAATCCAGTAAGGGCAAGATCAATTTTAGATAGAGGATTGTTAAAAAA BasePairs: . . . . . . 1 1 1 1 1 1 1 1 . . . . . 2 2 2 2 2 3 3 3 3 3 3 3 3 3 3 3 . . . . . . 4 4 4 . . . . . 4 4 4 . . 3 3 3 3 3 3 3 3 3 3 3 . 1 1 1 1 1 . 1 1 1 . . 2 2 2 2 2 . . . . FoldingAlgorithm: pknots *************************** 77. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000263 Gene: YBR059C AKL1 Position: 312 MFE: -26.30 Pairs: 27 MeanMFE: -14.43 StdevMFE: 2.54 zR: -4.67 MeanPairs: 19.89 StdevPairs: 3.38 zP: 2.10 SlipperySite: CCCAAAT StructureSequence: ATAGTACAATACTTCGATTCCAACGCCTCTCGCCGTCGTGATGGCGTTCAAGGATTTGAGGTTCTTTTGCTAATGGAATT BasePairs: . 1 1 1 1 1 . 1 1 . 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 . . 1 1 1 1 . . . . 1 1 1 1 . 1 1 1 1 1 1 . . . 1 1 1 . 1 1 1 1 1 1 1 . . 1 1 . 1 1 1 1 1 . . . . . . . . FoldingAlgorithm: pknots *************************** 78. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000263 Gene: YBR059C AKL1 Position: 1917 MFE: -22.30 Pairs: 28 MeanMFE: -16.39 StdevMFE: 3.02 zR: -1.96 MeanPairs: 22.19 StdevPairs: 3.38 zP: 1.72 SlipperySite: AAATTTC StructureSequence: CACTGGGAGGGATCGGTCCAATAAACCTATGCAGTTGGGTGGAACTATTGCTGGAGATAGTGGTAATAGAAGAGTCAACTTTCAGAATATT BasePairs: . . 1 1 1 1 1 1 1 . 1 1 1 1 . . 1 1 2 2 2 2 2 . 3 3 3 3 3 . . . . . . 3 3 3 3 3 . . . . . 2 2 2 2 2 4 4 4 . . . . 4 4 4 5 5 . . . . 5 5 1 1 . 1 1 . 1 1 . . 1 1 1 1 1 1 1 . . . . . . FoldingAlgorithm: pknots *************************** 79. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000267 Gene: YBR063C YBR063C Position: 258 MFE: -21.70 Pairs: 24 MeanMFE: -12.88 StdevMFE: 2.28 zR: -3.87 MeanPairs: 22.37 StdevPairs: 3.70 zP: 0.44 SlipperySite: AAAAAAC StructureSequence: TGACCAAGAAGATATCTGGGCATCCACAATAATTTTGGGTGTGATTATCGGGTATTTAATCTCTTCTATTAAGAGAAAGAACACTTTT BasePairs: . . . . . . . . . 1 1 1 1 1 1 1 1 1 1 . . 1 1 1 1 1 1 . . 1 1 . . . . 1 1 . 1 1 1 . 1 1 1 . . 1 1 1 1 1 1 1 1 1 1 . . 2 2 2 2 2 2 . . . . . 2 2 2 2 2 2 . . . . . . . . . . . . FoldingAlgorithm: pknots *************************** 80. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000269 Gene: YBR065C ECM2 Position: 312 MFE: -21.70 Pairs: 25 MeanMFE: -14.06 StdevMFE: 2.89 zR: -2.64 MeanPairs: 20.15 StdevPairs: 3.18 zP: 1.53 SlipperySite: AAAAAAC StructureSequence: CATGATGAAAAGGTTTCTGTCACTAAAAAACGTGAAATTAGGAGGAGCTCAGATTACGAGTGATCCGTCAGAAGCAGATAATATCGTT BasePairs: . 1 1 1 1 1 1 . . . . . 2 2 2 2 2 2 2 3 3 3 3 . . . . . . . . 3 3 3 3 4 . . . . 4 4 4 . . . 4 4 4 4 . . . . . . . 4 4 4 4 . . 4 4 4 . 4 2 2 2 2 2 2 2 . . . . . . 1 1 1 1 1 1 . FoldingAlgorithm: pknots *************************** 81. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000269 Gene: YBR065C ECM2 Position: 468 MFE: -17.90 Pairs: 22 MeanMFE: -12.32 StdevMFE: 2.46 zR: -2.27 MeanPairs: 19.40 StdevPairs: 3.34 zP: 0.78 SlipperySite: AAAAAAC StructureSequence: AACTGCATTGTATAAAAATGAAAAAGGTGCAAATGAGGTCAAAAACTTGGAAAAGTACGCGTCCGTGGACATTTCTCATATTTTGA BasePairs: . . . 1 1 1 1 1 1 . 2 2 2 . . . . 2 2 2 . . . . . 1 1 1 1 1 1 . . . 3 3 . 3 3 3 . . . . . . . 4 4 4 4 . . . 4 . . . . 4 . 4 4 4 4 . . 3 3 3 . . . 3 3 5 5 5 . . . . . 5 5 5 FoldingAlgorithm: pknots *************************** 82. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000270 Gene: YBR066C NRG2 Position: 534 MFE: -22.52 Pairs: 26 MeanMFE: -14.15 StdevMFE: 2.73 zR: -3.06 MeanPairs: 19.05 StdevPairs: 2.84 zP: 2.45 SlipperySite: AAAAAAT StructureSequence: TATCTGTCCGCATGAGGGCTGTGGACAGAGGTTTAGTAGACATGATAACTGTAATCAGCATTATCGAACTCATGC BasePairs: . . 1 1 1 1 1 1 1 1 1 1 . . . . . . . 1 1 1 1 1 1 1 1 1 1 2 2 2 2 2 . 2 2 2 2 . . . 3 3 3 3 . . . . . . . 3 3 3 3 4 4 4 2 2 2 2 . 2 2 2 2 2 . . 4 4 4 FoldingAlgorithm: pknots *************************** 83. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000273 Gene: YBR069C TAT1 Position: 258 MFE: -27.20 Pairs: 26 MeanMFE: -14.93 StdevMFE: 2.56 zR: -4.79 MeanPairs: 19.87 StdevPairs: 3.13 zP: 1.96 SlipperySite: AAAAAAC StructureSequence: GACAAAGTCGATCAAATCTCGTCACTTAGTCATGATCAGTCTCGGTACCGGTATAGGTACTGGTTTACTGGTCGGT BasePairs: 1 1 1 . 1 1 1 1 1 1 1 . . . . . . . 1 1 1 . . 1 1 1 1 . 1 1 1 . 2 2 2 2 2 2 2 2 . 2 2 2 2 2 2 2 2 . . . . . . 2 2 2 2 2 2 2 2 . . . 2 2 2 2 2 2 2 2 . . FoldingAlgorithm: pknots *************************** 84. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000273 Gene: YBR069C TAT1 Position: 516 MFE: -22.00 Pairs: 26 MeanMFE: -16.32 StdevMFE: 2.52 zR: -2.26 MeanPairs: 22.18 StdevPairs: 3.00 zP: 1.27 SlipperySite: GGGTTTT StructureSequence: TCTGTGGTTTACACCATTCAATGGCTAACTGTTCTGCCCTTACAATTGGTCACTGCGGCAATGACAGTTAAGTACTGGACGAGTGTA BasePairs: . . . 1 1 1 . . . . . 1 1 1 2 2 2 2 2 . . 3 3 3 . 3 3 3 3 3 3 3 3 . 3 3 3 3 . 3 . 3 3 . . . . . 3 3 . . . . 3 . 3 3 3 3 . . 3 3 3 3 3 3 3 3 . . . . 3 3 3 . . . 2 2 2 2 2 . . FoldingAlgorithm: pknots *************************** 85. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000284 Gene: YBR080C SEC18 Position: 615 MFE: -20.90 Pairs: 26 MeanMFE: -11.71 StdevMFE: 2.47 zR: -3.72 MeanPairs: 20.30 StdevPairs: 3.39 zP: 1.68 SlipperySite: TTTTTTC StructureSequence: AGAGATGGTTTAGTTAATTTGAAATCATCAAATTCATTAAGACCAAGATCAAATGCTGTGATCAGACCGGATTTCAAGTTTGAAGA BasePairs: . . . . . 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 . . . . . 1 1 1 1 1 1 1 . 1 1 1 1 1 . 1 1 1 1 . 2 2 2 2 2 . . . . . . . 2 2 2 2 2 . . . . . . . . 3 3 3 3 3 . . . . 3 3 3 3 3 . FoldingAlgorithm: pknots *************************** 86. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000284 Gene: YBR080C SEC18 Position: 1362 MFE: -26.10 Pairs: 28 MeanMFE: -16.74 StdevMFE: 2.53 zR: -3.70 MeanPairs: 22.01 StdevPairs: 3.03 zP: 1.98 SlipperySite: AAAAAAC StructureSequence: TTCTCTGGTGCTGAGATTGAGGGTTTAGTGAAGAGTGCAAGTTCTTTTGCAATCAACAAAACCGTCAACATCGGGAAAGGTGCCA BasePairs: . . . . . 1 1 1 1 1 1 1 . . 2 2 2 2 2 2 . 2 2 2 2 2 . 2 2 . . . 2 2 . 2 2 2 2 2 2 . . . . 2 2 2 2 2 2 . 2 2 . 2 2 . 2 2 2 2 2 . 2 2 2 . . 2 2 2 . . . . . . 1 1 1 1 1 1 1 FoldingAlgorithm: pknots *************************** 87. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000288 Gene: YBR084W MIS1 Position: 1533 MFE: -19.10 Pairs: 22 MeanMFE: -12.87 StdevMFE: 2.83 zR: -2.20 MeanPairs: 18.29 StdevPairs: 3.17 zP: 1.17 SlipperySite: AAAAAAA StructureSequence: GGCATCAGAAAGTTTACCCCATCCATGCAGAGAAGGCTTAAAAGATTGGATATTGAAAAAGAAGACCCTGATGCTTTAACACCTGA BasePairs: 1 1 1 1 1 1 1 1 . . . 1 1 1 1 . 1 . . . 2 2 2 2 2 . 3 3 . . . . . . . 3 3 . . . . . . . . . 2 2 2 2 2 . 4 4 . . . . 4 4 1 . 1 1 1 1 . 1 1 1 1 1 1 1 1 . . . . . . . . . . . FoldingAlgorithm: pknots *************************** 88. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000295 Gene: YBR091C MRS5 Position: 12 MFE: -23.10 Pairs: 22 MeanMFE: -16.22 StdevMFE: 2.31 zR: -2.98 MeanPairs: 17.03 StdevPairs: 2.25 zP: 2.21 SlipperySite: TTTAAAT StructureSequence: CTAAGGGGCAACCAGGAGGTCTCGCAAGAGAAGCTAGACGTTGCAGGAGTGCAATTCGATGCGATGTGCTC BasePairs: 1 1 . . . 2 2 . . . . 2 2 . . . 1 1 . 3 3 3 3 . . . . 3 3 3 3 4 4 4 . . . 4 4 4 4 4 4 4 4 . 4 4 4 . . . . . 4 4 4 . . 4 4 4 4 4 4 4 4 4 4 4 . FoldingAlgorithm: pknots *************************** 89. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000299 Gene: YBR095C RXT2 Position: 930 MFE: -21.70 Pairs: 21 MeanMFE: -14.25 StdevMFE: 2.77 zR: -2.69 MeanPairs: 19.30 StdevPairs: 3.54 zP: 0.48 SlipperySite: TTTTTTT StructureSequence: TTGCCAAGGTTGGAACAATCTAATGCGCTGTTATCGTTGCTGCCATCTTCTTCCGGTTCTGCTTCTATATCAACATTAACAGCGGCC BasePairs: . . 1 1 1 . . . 2 2 2 2 2 2 . . . . 2 2 2 2 2 2 . . 3 3 3 3 3 3 3 . . . . . 4 4 . 4 4 4 . . . . . . . . . . 4 4 4 . . . 4 4 . . . . . . . . . . . . . . 3 3 3 3 3 3 3 1 1 1 . FoldingAlgorithm: pknots *************************** 90. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000299 Gene: YBR095C RXT2 Position: 1167 MFE: -22.40 Pairs: 23 MeanMFE: -17.76 StdevMFE: 2.46 zR: -1.89 MeanPairs: 23.74 StdevPairs: 3.05 zP: -0.24 SlipperySite: TTTAAAT StructureSequence: GAGTCGGGAATATTTGGGTATATCTGACGATGATATTACTATCCCGGTGGCTCTACGTGTTGTGAAGAGAGGTCTGATCAGTGCTACAA BasePairs: . . . . 1 1 1 1 1 . . . . . . . 2 2 2 2 2 2 2 2 . . . . . . . 2 2 2 2 . 2 2 2 2 . 1 1 1 1 1 3 3 3 3 3 . 4 4 . 4 . . . 4 4 . . . . 4 4 . 4 . 4 4 . . . . . . . . . . 3 3 3 3 3 . . FoldingAlgorithm: pknots *************************** 91. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000305 Gene: YBR101C YBR101C Position: 252 MFE: -20.20 Pairs: 22 MeanMFE: -14.86 StdevMFE: 2.98 zR: -1.79 MeanPairs: 20.47 StdevPairs: 3.16 zP: 0.48 SlipperySite: TTTAAAA StructureSequence: GTGGGAGCCATTGTTGGATGTTCTTGTTCAGACGAAGGATGAAGAACTACGTGCTGCTGCTTTATCCATTATTGGAA BasePairs: 1 1 1 1 . 1 1 1 . . . 1 1 1 . . . . . 2 2 2 2 2 2 . . 2 2 . . . . . . . . 2 2 . . 2 2 2 2 2 2 . 1 1 1 . 1 1 1 . 1 1 1 1 . . . . 3 3 3 3 . . . . 3 3 3 3 . FoldingAlgorithm: pknots *************************** 92. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000306 Gene: YBR102C EXO84 Position: 756 MFE: -21.80 Pairs: 23 MeanMFE: -12.29 StdevMFE: 2.46 zR: -3.87 MeanPairs: 19.32 StdevPairs: 3.13 zP: 1.17 SlipperySite: TTTAAAC StructureSequence: GGTTTTGGATCAGTGCACCAAAATAGCTGAAAAAAGGTTACAATTGCAGGATCAAATAGATCAAGAGAGACAAGGCAATTTTAACAATGTT BasePairs: . 1 1 1 1 1 1 1 . . . . . . . . . 1 1 1 1 1 1 1 . . 2 2 . . . . . . 2 2 3 3 3 3 . 3 3 3 3 3 3 . . 4 4 4 4 . . . . . 4 4 4 4 . . . . . . . . . . . . 3 3 3 3 3 3 . 3 3 3 3 . . . . . . FoldingAlgorithm: pknots *************************** 93. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000307 Gene: YBR103W SIF2 Position: 225 MFE: -17.90 Pairs: 20 MeanMFE: -11.76 StdevMFE: 2.57 zR: -2.39 MeanPairs: 19.32 StdevPairs: 3.50 zP: 0.19 SlipperySite: TTTAAAT StructureSequence: ACATCATCTTTCTGAAGATTTCAATTTGGTTCAGGCGCTGCAAATAGATAAAGAAAAATTTCCTGAGATCTCTTCTGAAGGAA BasePairs: . . . . . . 1 1 1 1 1 1 . 1 1 1 1 1 . . . . . . . . . . . 2 2 2 2 2 2 . . 3 3 . 3 . . . . . 3 . . . . 3 3 . . . . . . . . 2 2 2 2 2 2 . . . 1 1 1 1 1 . 1 1 1 1 1 1 . FoldingAlgorithm: pknots *************************** 94. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000309 Gene: YBR105C VID24 Position: 663 MFE: -17.80 Pairs: 23 MeanMFE: -12.78 StdevMFE: 2.48 zR: -2.03 MeanPairs: 17.03 StdevPairs: 3.40 zP: 1.76 SlipperySite: AAATTTC StructureSequence: CTCCTTTAGACAGCTTTTCCTGATGAGCCAAAAAAACGGTCTCAACTCAACTGACGACAATGGCACTACAAATGCAGCCAAGAAGTTG BasePairs: . . . 1 . . . . 1 . 2 2 2 2 2 2 2 2 . 2 2 2 . . 3 . 3 3 3 3 . . . . . . . . 4 4 4 4 4 4 . . . . . . . 4 4 4 . 4 4 4 . . 3 3 3 3 . 3 . . . . . . . . 2 2 2 . . . 2 2 2 2 2 2 2 2 FoldingAlgorithm: pknots *************************** 95. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000317 Gene: YBR113W YBR113W Position: 216 MFE: -21.60 Pairs: 31 MeanMFE: -12.64 StdevMFE: 2.57 zR: -3.49 MeanPairs: 22.79 StdevPairs: 3.58 zP: 2.29 SlipperySite: TTTTTTT StructureSequence: AGTCGTGTTTTGTTTGTTGTTGTTGCTGTTGTAGTTGTAGTACTAGTCTAAAGGCTTATAGCAGTGAAAAAGAAAAACAGAAATATGGGAA BasePairs: . . 1 1 1 1 1 1 1 1 1 . . . . 1 1 1 . 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 . . . . . . . 1 1 1 . . 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 . . . 1 1 . . . 1 1 1 . 1 1 1 1 1 1 1 1 1 . . . FoldingAlgorithm: pknots *************************** 96. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000317 Gene: YBR113W YBR113W Position: 219 MFE: -21.60 Pairs: 31 MeanMFE: -12.28 StdevMFE: 2.29 zR: -4.07 MeanPairs: 22.77 StdevPairs: 3.52 zP: 2.34 SlipperySite: TTTTTTC StructureSequence: AGTCGTGTTTTGTTTGTTGTTGTTGCTGTTGTAGTTGTAGTACTAGTCTAAAGGCTTATAGCAGTGAAAAAGAAAAACAGAAATATGGGAA BasePairs: . . 1 1 1 1 1 1 1 1 1 . . . . 1 1 1 . 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 1 1 . . . . . . . 1 1 1 . . 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 . . . 1 1 . . . 1 1 1 . 1 1 1 1 1 1 1 1 1 . . . FoldingAlgorithm: pknots *************************** 97. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000319 Gene: YBR115C LYS2 Position: 1728 MFE: -19.30 Pairs: 26 MeanMFE: -13.86 StdevMFE: 3.02 zR: -1.80 MeanPairs: 21.37 StdevPairs: 3.56 zP: 1.30 SlipperySite: AAAAAAT StructureSequence: CGATCCAAACTTTTTGAAAAAATTGAAAGATGTCATGCCTGCTGGTAAAGGTATGTTGAACGTTCAGCTACTAGTTGTTAACAGGAA BasePairs: . . . . . . . . . 1 . . . . 1 1 1 . . . . 1 1 1 . . . . 1 1 1 . 1 1 1 . 1 2 2 2 2 . 2 2 2 2 2 2 . 2 2 2 2 . 2 2 2 2 2 . . . . 2 2 2 2 2 2 2 2 2 . . 2 2 2 2 2 2 . 2 2 2 2 . . FoldingAlgorithm: pknots *************************** 98. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000326 Gene: YBR122C MRPL36 Position: 144 MFE: -20.30 Pairs: 26 MeanMFE: -15.20 StdevMFE: 2.42 zR: -2.11 MeanPairs: 21.06 StdevPairs: 3.14 zP: 1.57 SlipperySite: AAAAAAA StructureSequence: TTCAACTGGGGAAGTCACGACCGGCTATTTATCACCAATTCAATGTCAAAATGGAGTTGAGTGATGGAAGTGTAGTTATCCGG BasePairs: . 1 1 . 1 1 1 . . . . . 1 1 1 . . . 1 1 2 2 2 2 . 2 2 . 3 3 3 3 3 3 3 3 3 3 3 3 3 . 3 3 . . . . . . 3 3 . 3 3 3 3 3 3 . 3 3 3 3 3 3 3 . . . . . . . . . 2 2 . 2 2 2 2 FoldingAlgorithm: pknots *************************** 99. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000332 Gene: YBR128C APG14 Position: 420 MFE: -20.80 Pairs: 23 MeanMFE: -12.23 StdevMFE: 2.77 zR: -3.09 MeanPairs: 18.29 StdevPairs: 3.06 zP: 1.54 SlipperySite: AAAAAAT StructureSequence: CTGGCACAAGTATCGAAGATTTGTGAATCGGCTAGAGATTACAAGCTCAATCTACTAAATAATTGGTTTGTGATCC BasePairs: 1 1 1 1 1 . . . . 1 . . 1 1 1 . . . . . . . . 1 1 1 . . 1 . 1 1 1 1 1 . 2 2 2 2 2 2 2 2 2 2 . 2 2 2 2 . . . . . . . . . . 2 2 2 2 2 2 2 2 2 2 2 2 2 2 . FoldingAlgorithm: pknots *************************** 100. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000334 Gene: YBR130C SHE3 Position: 579 MFE: -20.40 Pairs: 30 MeanMFE: -10.56 StdevMFE: 2.46 zR: -3.99 MeanPairs: 19.85 StdevPairs: 3.87 zP: 2.62 SlipperySite: AAATTTA StructureSequence: TGGTTCAGATACTAGTTCAAATTCAGATATAGAATTGAATTTAAATAAATTCAATGACTCTGTGAAAGATTTGAAATCTCTGGAA BasePairs: . . . 1 1 1 1 1 1 . 1 . . . . 1 1 1 1 1 1 1 1 . . . . 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 . . . . 2 2 2 2 2 2 2 2 2 . . . 2 2 2 2 2 2 . . . 1 1 1 1 1 1 1 1 . 1 . 1 1 1 1 1 1 . FoldingAlgorithm: pknots *************************** 101. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000334 Gene: YBR130C SHE3 Position: 582 MFE: -20.40 Pairs: 30 MeanMFE: -10.92 StdevMFE: 2.49 zR: -3.80 MeanPairs: 20.54 StdevPairs: 3.60 zP: 2.62 SlipperySite: TTTAAAT StructureSequence: TGGTTCAGATACTAGTTCAAATTCAGATATAGAATTGAATTTAAATAAATTCAATGACTCTGTGAAAGATTTGAAATCTCTGGAA BasePairs: . . . 1 1 1 1 1 1 . 1 . . . . 1 1 1 1 1 1 1 1 . . . . 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 . . . . 2 2 2 2 2 2 2 2 2 . . . 2 2 2 2 2 2 . . . 1 1 1 1 1 1 1 1 . 1 . 1 1 1 1 1 1 . FoldingAlgorithm: pknots *************************** 102. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000335 Gene: YBR131W CCZ1 Position: 555 MFE: -17.70 Pairs: 26 MeanMFE: -12.78 StdevMFE: 2.96 zR: -1.66 MeanPairs: 19.98 StdevPairs: 3.30 zP: 1.83 SlipperySite: AAAAAAT StructureSequence: CGAAGAGTCATGGGACGCTATAATCTTGCAGAATATTCTTTTAGATAAAAAGAGTTATCTAGGACTAAAGGACATTTTGGT BasePairs: . . 1 1 1 1 . . . 2 2 2 2 . . . . 2 2 2 2 . . 1 1 1 1 . 3 3 3 3 3 3 . 3 3 3 3 3 3 . 4 4 4 4 4 4 . . . . . . 4 4 4 4 4 4 . . . . . . 3 3 3 3 3 3 . 3 3 3 3 3 3 . . FoldingAlgorithm: pknots *************************** 103. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000337 Gene: YBR133C HSL7 Position: 1242 MFE: -19.80 Pairs: 25 MeanMFE: -10.78 StdevMFE: 2.60 zR: -3.48 MeanPairs: 17.62 StdevPairs: 3.12 zP: 2.37 SlipperySite: AAAAAAT StructureSequence: CATATCTGTACTTGCAAAAAAGAAATTTCGACTGTTGGGATAATAGAGTGAAATTAATCAAGGAGGATATGACCAAATGGCA BasePairs: 1 1 1 1 1 1 1 . . . 2 2 2 2 . . . . . . . . . 3 3 3 3 3 3 3 . 3 3 3 3 3 . . . . . 3 3 3 3 3 . . 3 3 3 3 3 3 3 . . . 2 2 2 2 . . 1 1 1 1 1 1 1 . 4 4 . . . . 4 4 . . FoldingAlgorithm: pknots *************************** 104. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000340 Gene: YBR136W MEC1 Position: 2295 MFE: -20.80 Pairs: 27 MeanMFE: -12.88 StdevMFE: 2.69 zR: -2.94 MeanPairs: 20.67 StdevPairs: 3.53 zP: 1.79 SlipperySite: AAAAAAC StructureSequence: GTAGGCAAATATTTGCCGTAGCTTTGGTAAAACACGGATTATTTTCTTTGGATATCTTGGAAACCCTTTTTTTAAATAGGGCT BasePairs: . . . 1 1 1 1 1 . . . . 1 1 1 1 1 . . 2 2 2 2 2 2 2 . 2 2 2 2 2 . 2 . 2 2 . . . . . 2 2 2 2 2 . . 2 2 . . . . 2 2 . 2 2 2 2 2 . 2 2 . 2 . 2 2 2 2 2 . . 2 2 2 2 2 2 2 FoldingAlgorithm: pknots *************************** 105. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000340 Gene: YBR136W MEC1 Position: 3945 MFE: -20.50 Pairs: 24 MeanMFE: -13.59 StdevMFE: 2.85 zR: -2.42 MeanPairs: 22.33 StdevPairs: 3.22 zP: 0.52 SlipperySite: TTTAAAC StructureSequence: ATTATTGAATTTGACAGCATTTTCACGTGCAATCTGGAAGGAATGAATAACTTGCAAGTGGATTCGTTAAGAATGTGCTATGAATCC BasePairs: . . . . . 1 1 1 1 . . 1 1 . . . . 1 1 . . 1 1 1 1 . 2 2 . 2 2 . 2 2 2 . . . . 2 2 2 . 2 2 . . . . 2 2 . 3 . . . . 3 . 4 4 4 4 4 4 4 4 . . 4 4 . . . . . . 4 4 4 4 4 4 4 4 4 4 FoldingAlgorithm: pknots *************************** 106. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000340 Gene: YBR136W MEC1 Position: 4809 MFE: -18.60 Pairs: 25 MeanMFE: -11.81 StdevMFE: 2.57 zR: -2.65 MeanPairs: 20.26 StdevPairs: 3.18 zP: 1.49 SlipperySite: AAATTTT StructureSequence: AACGTCATCTAAAGAGACGACGCTGCTAAAGAAACAGAATTTATTGATGAAATTACACAGTTTATATGACCTCAGTTTTTTATCTTCTG BasePairs: . . 1 1 1 1 . 1 1 1 . . . . 1 1 1 . 1 1 1 1 2 2 . . . . . 2 2 . . . 3 3 3 3 . . . . . . . 4 4 4 4 4 4 4 . . 4 4 . . . 5 5 5 . . . . . 5 5 5 . . . . 4 4 . 4 4 4 4 4 4 4 . 3 3 3 3 FoldingAlgorithm: pknots *************************** 107. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000344 Gene: YBR140C IRA1 Position: 1656 MFE: -21.90 Pairs: 22 MeanMFE: -14.29 StdevMFE: 2.83 zR: -2.69 MeanPairs: 21.32 StdevPairs: 3.34 zP: 0.20 SlipperySite: TTTAAAC StructureSequence: TATGGAAAATATTATGGAGCTGTATTCCAACTATACCGGATCAGAACTATCCTCCCATACTGCCATATTAAGGTTTTTGGTGGTTCTG BasePairs: . 1 1 1 1 . . . . . . . . . . 2 2 2 . 2 2 2 . . . 2 2 2 . . . . . . . . . 2 2 2 . 2 2 2 . . . . . 2 2 2 . . 1 1 1 1 3 3 3 3 3 3 3 . 3 3 . . . . 3 3 . . . 3 3 3 3 3 3 3 . . . . FoldingAlgorithm: pknots *************************** 108. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000344 Gene: YBR140C IRA1 Position: 1908 MFE: -18.70 Pairs: 26 MeanMFE: -12.39 StdevMFE: 2.64 zR: -2.39 MeanPairs: 21.09 StdevPairs: 3.54 zP: 1.39 SlipperySite: AAAAAAA StructureSequence: TTACAGCAAGGCAGGAAACGTAACGTTAAATTTTTGACATATTTGATTAGAAATTTGAATGGGGGACAGTTCGTTTCAGATGTT BasePairs: . . . . . . . . . . 1 1 1 . 1 1 1 1 1 1 . 1 1 1 . 2 2 2 2 2 2 2 2 2 2 2 2 2 2 . . . . 2 2 . 2 2 2 2 2 2 2 2 2 2 2 2 . . . . . . . . . . 1 1 1 1 1 1 1 1 1 . . . 1 1 1 . FoldingAlgorithm: pknots *************************** 109. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000345 Gene: YBR141C YBR141C Position: 705 MFE: -20.30 Pairs: 17 MeanMFE: -13.74 StdevMFE: 2.67 zR: -2.46 MeanPairs: 18.71 StdevPairs: 3.20 zP: -0.53 SlipperySite: AAATTTT StructureSequence: AAAATCACAGGGATCGCGGTGCAATGTGCCATCGCATGGTCAAATTTCTCAAGCCGCAAGGCTACATCTTTATTGTTCT BasePairs: . . . 1 1 1 . . . . . 1 1 1 . 2 2 2 2 2 2 2 . . . . . 2 . 2 2 2 2 2 2 . . . . . . . . . . . . . . . . 3 3 3 3 . . . . 3 3 3 3 4 4 4 . . . . . . . 4 4 4 . . . FoldingAlgorithm: pknots *************************** 110. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000347 Gene: YBR143C SUP45 Position: 18 MFE: -21.80 Pairs: 28 MeanMFE: -13.93 StdevMFE: 2.38 zR: -3.30 MeanPairs: 22.15 StdevPairs: 3.45 zP: 1.69 SlipperySite: AAAAAAT StructureSequence: TGAGATCTGGAAGGTCAAGAAGTTGGTCCAATCTTTAGAAAAAGCTAGAGGTAATGGTACTTCTATGATTTCCTTAGTTATTCC BasePairs: . . . 1 1 1 . . 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 . . . . 1 1 1 1 1 1 1 1 1 1 1 . . . . . . 1 1 1 1 1 1 1 1 . . 1 1 1 . 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 . . . 1 1 1 . . . . . FoldingAlgorithm: pknots *************************** 111. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000351 Gene: YBR147W YBR147W Position: 489 MFE: -17.80 Pairs: 26 MeanMFE: -12.23 StdevMFE: 2.77 zR: -2.01 MeanPairs: 19.93 StdevPairs: 3.49 zP: 1.74 SlipperySite: TTTTTTC StructureSequence: TGACTTCTTAATTGTTTCAGGTGTACTTATTGCCGGAATTTTGTCATGGTATATATCTTACTGTTCCGGCCTAGATAACGGTATT BasePairs: . . 1 1 1 1 . . . . . . . . . . . . 1 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 . . . 2 2 . . . 2 2 2 . . . . 2 2 2 . . 2 2 . 2 2 2 2 2 2 2 2 . . . 2 2 2 2 . . 2 2 2 2 2 . FoldingAlgorithm: pknots *************************** 112. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000351 Gene: YBR147W YBR147W Position: 588 MFE: -20.00 Pairs: 27 MeanMFE: -13.37 StdevMFE: 2.71 zR: -2.45 MeanPairs: 21.21 StdevPairs: 3.66 zP: 1.58 SlipperySite: AAAAAAA StructureSequence: TTCGAACAGATTAATTTACCTGCACAAATTTTAGGGTATTTAAGTGCGATACTGTACTTGGGCTCTAGGATCCCTCAGATTGTTC BasePairs: . . . 1 1 1 1 1 1 . . . . . . . . . . 2 2 2 . . . . . 3 3 3 3 3 3 3 3 3 3 . . . 3 3 3 3 3 3 3 3 . . . . 3 3 3 3 3 3 3 3 . 3 3 3 3 3 3 3 3 3 3 . . . . 2 2 2 . 1 1 1 1 1 1 FoldingAlgorithm: pknots *************************** 113. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000362 Gene: YBR158W AMN1 Position: 1203 MFE: -28.50 Pairs: 28 MeanMFE: -21.57 StdevMFE: 3.57 zR: -1.94 MeanPairs: 26.03 StdevPairs: 3.17 zP: 0.62 SlipperySite: AAATTTA StructureSequence: TTACGAGTGTCTCACTGGTCGCGCTAGGCAAATACACACAGGTGGAAACTGTGGGGTTTGCCGGTTGTGATGTTGATGATGCCGGTATTTG BasePairs: . . . 1 1 . 1 1 1 1 1 1 1 1 . . . 2 2 2 2 2 2 . . . 3 3 3 3 3 3 3 . . . 3 3 3 3 3 . . . . . . . 3 3 3 3 3 . . 3 3 3 3 3 3 3 . . . 2 2 2 2 2 2 . . 1 1 1 . 1 1 1 1 1 1 1 . . . . . . . FoldingAlgorithm: pknots *************************** 114. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000363 Gene: YBR159W YBR159W Position: 138 MFE: -22.20 Pairs: 23 MeanMFE: -13.77 StdevMFE: 2.99 zR: -2.82 MeanPairs: 18.74 StdevPairs: 3.33 zP: 1.28 SlipperySite: TTTTTTA StructureSequence: GCAGTCAATTTCGACAAGTATGGTGCTAAAACTGGTAAATACTGTGCTATCACTGGTGCAAGTGACGGTATTGG BasePairs: . . . 1 1 1 . . . . . . 1 1 1 . 2 2 2 2 2 . . 2 2 2 2 2 . . . . 2 2 2 2 2 . 2 2 2 2 2 3 3 3 3 3 . 3 3 3 3 3 . . . . . . 3 3 3 3 3 . 3 3 3 3 3 . . . FoldingAlgorithm: pknots *************************** 115. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000376 Gene: YBR172C SMY2 Position: 1761 MFE: -20.21 Pairs: 29 MeanMFE: -12.87 StdevMFE: 3.06 zR: -2.40 MeanPairs: 19.02 StdevPairs: 3.01 zP: 3.32 SlipperySite: CCCAAAA StructureSequence: GGATGAAAGAGTCGTCTCCGTTAAAGGAGTTGGAAGATCCAAATTTCATAGAAGAGCAGAAAAAACTATGGGAAAAGGTTCAGAGTTCTT BasePairs: . 1 1 1 1 1 . . . . . 1 1 1 1 1 2 2 2 . . . . . . 2 2 2 . 3 3 3 3 . . . . . 3 3 3 3 . 4 4 4 4 4 4 4 . 5 5 5 5 5 5 . 5 5 5 . . . . 5 4 4 4 4 4 4 4 . . . 5 . 5 5 5 . . . 5 5 5 5 5 5 FoldingAlgorithm: pknots *************************** 116. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000380 Gene: YBR176W ECM31 Position: 771 MFE: -18.50 Pairs: 19 MeanMFE: -12.85 StdevMFE: 2.86 zR: -1.98 MeanPairs: 18.02 StdevPairs: 3.33 zP: 0.29 SlipperySite: CCCAAAA StructureSequence: TGAAGCAAGCTGTAAATATGACAGATATTGCCACTCAGGGCTTGAAGGAGTACATTGCAAGTGTAGAGGATAGGACATTT BasePairs: . . . . 1 1 1 1 . 1 1 1 1 . . . . . . . 1 1 1 1 . . . 1 1 1 1 2 2 2 2 2 2 2 . 2 2 2 2 . . . . 2 2 2 2 . . . 2 2 2 . . 2 2 2 2 . . . . . . . . . . . . . . . . . FoldingAlgorithm: pknots *************************** 117. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000381 Gene: YBR177C EHT1 Position: 642 MFE: -18.40 Pairs: 22 MeanMFE: -11.06 StdevMFE: 2.74 zR: -2.68 MeanPairs: 16.62 StdevPairs: 3.05 zP: 1.76 SlipperySite: AAATTTA StructureSequence: TACAGCTTATCACACAATGGATATTCGCGAGTTTTTGCAAAGAGAAAAGCAAAGACATCCAGATAGAAAACTATACGCTGTG BasePairs: . 1 1 1 1 1 . 1 1 1 . . . . . . . 2 2 2 2 2 . 2 2 . 2 2 . . . 3 3 3 3 3 . . . . 3 3 3 3 3 . . . 2 2 . 2 2 . . . 2 2 2 2 2 . . . . . . . . . . . 1 1 1 . 1 1 1 1 1 . FoldingAlgorithm: pknots *************************** 118. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000383 Gene: YBR179C FZO1 Position: 525 MFE: -18.30 Pairs: 27 MeanMFE: -10.54 StdevMFE: 2.22 zR: -3.50 MeanPairs: 17.71 StdevPairs: 2.89 zP: 3.22 SlipperySite: TTTAAAC StructureSequence: TTGAAAAAAAGAGTGGATGACGTTTCATCTAAAGTATTCATCACAGGTGATGTAAATACTGGTAAATCAGCTCTTT BasePairs: . 1 . . . . 1 2 2 2 2 2 2 3 3 3 3 3 3 3 . . . . 3 3 3 3 3 3 3 . 4 4 4 4 4 4 4 4 4 4 4 . . . . 4 4 4 4 4 . . 4 4 4 4 4 4 5 5 . . . . 5 5 . . 2 2 2 2 2 2 FoldingAlgorithm: pknots *************************** 119. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000386 Gene: YBR182C SMP1 Position: 825 MFE: -18.66 Pairs: 22 MeanMFE: -12.31 StdevMFE: 2.76 zR: -2.30 MeanPairs: 17.21 StdevPairs: 3.16 zP: 1.52 SlipperySite: GGGAAAA StructureSequence: TTTAATGGGACGGGTGACAGCGAGAGCTTTGAAGCAAAGCAAAAGATACACCCGACAGTTGCTATATCAAATACTTT BasePairs: . 1 1 . . . . . 1 1 2 2 2 2 2 2 . . 3 3 3 . . . . 3 3 3 4 4 4 4 . 4 . . . 4 4 4 4 4 . . . . 4 . 2 2 2 2 2 2 . . 4 . 4 4 4 4 4 . 4 . 4 4 4 4 . . . . . . . FoldingAlgorithm: pknots *************************** 120. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000391 Gene: YBR187W YBR187W Position: 123 MFE: -17.80 Pairs: 18 MeanMFE: -13.01 StdevMFE: 2.63 zR: -1.82 MeanPairs: 18.46 StdevPairs: 2.95 zP: -0.16 SlipperySite: TTTTTTA StructureSequence: TCCGTTTCTATGATTGGGCTTTCTGAAATTGGTGACAAAACCTTCTTGATCGCAGCCTTGATGGCAATGCGTCA BasePairs: . 1 1 1 1 1 . . . . . . . . . 2 2 2 2 2 . 2 2 . 2 2 . . . . 2 2 2 . . . . . . 2 2 2 . 2 2 . . 2 2 . . . . 2 2 2 2 2 . 1 1 1 1 1 3 . . . . . 3 . . . FoldingAlgorithm: pknots *************************** 121. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000396 Gene: YBR192W RIM2 Position: 390 MFE: -20.80 Pairs: 24 MeanMFE: -14.10 StdevMFE: 2.78 zR: -2.41 MeanPairs: 22.94 StdevPairs: 3.75 zP: 0.28 SlipperySite: GGGTTTT StructureSequence: CTTGTTTAAGGGTTTGGGCCCCAATTTAGTCGGGGTTATTCCAGCAAGAAGTATTAATTTTTTTACCTATGGAACTACTAAAGATAT BasePairs: 1 1 1 1 1 1 . . . 1 1 1 . . . . 1 1 1 1 1 1 . . . . . . . . . 1 1 1 1 1 1 . . 1 1 1 1 1 1 1 1 1 . . 2 2 2 . . 2 . . . . 2 . . 2 2 2 3 3 . 3 3 3 . . . . . 3 3 3 . 3 3 . . . . FoldingAlgorithm: pknots *************************** 122. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000396 Gene: YBR192W RIM2 Position: 690 MFE: -22.50 Pairs: 28 MeanMFE: -13.96 StdevMFE: 2.96 zR: -2.89 MeanPairs: 22.07 StdevPairs: 3.48 zP: 1.70 SlipperySite: GGGTTTC StructureSequence: CTTGTACAAAGGGTTGAGTGCCTCTTATTTGGGTTCTGTTGAAGGTATACTTCAATGGCTATTATATGAACAAATGAAGAGGTT BasePairs: 1 1 1 1 . . 1 . . . . 1 . . 1 1 1 1 . 2 2 2 2 2 2 2 2 2 2 2 2 . 3 3 . 4 4 4 4 4 4 4 4 4 . . . . . 4 4 4 4 4 4 4 4 4 . . . . . 3 3 . . . . . 2 2 2 2 2 . 2 2 2 2 2 2 2 . FoldingAlgorithm: pknots *************************** 123. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000399 Gene: YBR195C MSI1 Position: 1050 MFE: -25.62 Pairs: 25 MeanMFE: -18.71 StdevMFE: 3.33 zR: -2.07 MeanPairs: 22.93 StdevPairs: 2.99 zP: 0.69 SlipperySite: AAATTTC StructureSequence: CTGTATTGGCAACGGCTGGCCAAGAAGATGGGTTAGTCAAGCTATGGGATACCTCCTGCGAAGAAACTATATTTACCCATGGTGGTCAT BasePairs: 1 1 . . . 2 2 2 2 2 . . . 3 3 3 3 3 2 2 2 2 2 . . 1 1 4 4 4 4 4 4 . . . 5 5 . . 5 5 . . . 5 5 5 . . . . . 5 5 5 . 5 5 . . . 5 5 . . . . . . . . . . 4 4 4 4 4 4 . . 3 3 3 3 3 . . FoldingAlgorithm: pknots *************************** 124. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000402 Gene: YBR198C TAF5 Position: 924 MFE: -20.00 Pairs: 25 MeanMFE: -13.87 StdevMFE: 2.73 zR: -2.25 MeanPairs: 21.48 StdevPairs: 3.43 zP: 1.03 SlipperySite: AAATTTA StructureSequence: GAATTCTGTTCCTGTCAAGCTGGGACCTTTCCCAAAAGACGAGGAGTTTGTTAAGGAGATTGAAACTGAATTGAAAATTAAGGATGAT BasePairs: . . . . 1 1 . . . 1 1 1 1 . 2 2 2 2 . 2 3 3 3 3 3 . . . . 3 3 3 3 3 . . 4 4 4 4 . . . . . 4 4 4 4 5 5 5 . 5 5 . . . . 5 5 . . 5 5 5 . 2 . . 2 2 2 2 . . . . . . 1 1 1 1 . 1 1 . FoldingAlgorithm: pknots *************************** 125. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000403 Gene: YBR199W KTR4 Position: 999 MFE: -17.41 Pairs: 28 MeanMFE: -11.77 StdevMFE: 2.76 zR: -2.04 MeanPairs: 19.96 StdevPairs: 3.71 zP: 2.16 SlipperySite: AAAAAAT StructureSequence: ATACTCAAGGGTATTCAACTTGTCATTTCTGGACCAATTTTGAAATAGTCGATTTAGACTTTTTGAGGTCAGAACCTTATGA BasePairs: 1 1 1 1 . 2 2 2 2 . 1 1 1 1 . . . . 2 2 2 2 3 3 3 3 . 3 3 3 3 3 . . . . . . 4 4 4 4 4 4 4 . 4 4 4 4 . . . . . . 4 4 4 4 4 4 4 4 4 4 4 . 3 3 3 3 3 . . . . . 3 3 3 3 FoldingAlgorithm: pknots *************************** 126. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000407 Gene: YBR203W YBR203W Position: 2268 MFE: -20.80 Pairs: 26 MeanMFE: -12.53 StdevMFE: 2.92 zR: -2.83 MeanPairs: 20.90 StdevPairs: 3.55 zP: 1.44 SlipperySite: AAATTTT StructureSequence: CTGGGCTTGTAATGCCAAATTGCATGAATTTGTCGCATTGATGGTTATGGATCATCTTTCAAATTTAGATGATTTAGGATT BasePairs: . . . 1 1 1 1 . . 1 1 1 1 1 1 1 1 1 1 1 1 . . . . . 1 1 1 1 1 1 . . 1 1 1 1 1 1 . . 1 1 1 1 . 2 2 2 2 2 2 2 2 2 2 . . . . . . . . . 2 2 2 2 2 2 2 2 2 2 . . . . . FoldingAlgorithm: pknots *************************** 127. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000407 Gene: YBR203W YBR203W Position: 2397 MFE: -23.60 Pairs: 24 MeanMFE: -15.31 StdevMFE: 3.02 zR: -2.74 MeanPairs: 20.45 StdevPairs: 3.24 zP: 1.10 SlipperySite: AAAAAAC StructureSequence: TGCCGAGACCCGGATATTCTCGAAATATCAAACTTATTTGATATTAGATATGGGGCCGGATCTGAGGCTGATGCTACTTC BasePairs: . 1 1 1 . 1 1 1 . 1 1 1 1 . 1 1 1 . . 1 1 . . 1 1 1 1 1 1 1 1 1 . . . . 1 1 1 1 1 1 1 1 1 . 1 1 . 1 1 1 . . . 1 1 1 1 . 1 1 1 . . 1 1 1 . . . . . . . . . . . . FoldingAlgorithm: pknots *************************** 128. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000416 Gene: YBR212W NGR1 Position: 681 MFE: -23.10 Pairs: 26 MeanMFE: -17.23 StdevMFE: 2.48 zR: -2.37 MeanPairs: 22.73 StdevPairs: 3.05 zP: 1.07 SlipperySite: CCCTTTA StructureSequence: ACAGGATCATCTCGTTGTTTTGGATTTGTCAGATTCGGTGATGAAGATGAGCGCCGCAGGGCACTGATTGAGATGAGTGGGAAATGGT BasePairs: . 1 1 . . . 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 2 2 2 2 . . . . . 2 2 2 2 3 3 3 3 3 . . . . . . . . . . . 3 3 3 3 3 1 1 1 1 1 1 1 . . . . . 1 1 1 1 1 1 1 1 . 1 1 . . . . . . . . . FoldingAlgorithm: pknots *************************** 129. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000420 Gene: YBR216C YBR216C Position: 1158 MFE: -18.70 Pairs: 23 MeanMFE: -9.13 StdevMFE: 2.24 zR: -4.27 MeanPairs: 16.79 StdevPairs: 3.28 zP: 1.89 SlipperySite: AAAAAAT StructureSequence: GTTGGTTTGGACTATAATGGTGTAATATTATTTTCTGGTATCCACTATTTGGAAACCAATCAACATTTAG BasePairs: 1 1 1 1 1 1 1 . 2 2 2 . . 2 2 2 2 2 2 . . . . . . 2 2 2 2 2 2 . . 2 2 2 3 3 3 . 3 3 3 3 . . . . . 3 3 3 3 . 3 3 3 1 1 1 1 1 1 1 . . . . . . FoldingAlgorithm: pknots *************************** 130. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000430 Gene: YBR226C YBR226C Position: 90 MFE: -19.90 Pairs: 24 MeanMFE: -11.62 StdevMFE: 2.67 zR: -3.10 MeanPairs: 18.64 StdevPairs: 3.50 zP: 1.53 SlipperySite: AAAAAAA StructureSequence: AATATTGGCTAAAGTGTTTCAAATTGGTTCTACGATACTGGGAGACTACTCCTTATCATAATGCTTTTTGTCCAGTAGT BasePairs: . . 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 . . . . . . 2 2 2 2 . . . . . . . . . . . 3 3 3 3 3 . . . . 3 3 3 3 3 . 2 2 2 2 . 1 1 1 1 1 1 1 1 . . 1 . 1 1 1 1 1 1 . . FoldingAlgorithm: pknots *************************** 131. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000430 Gene: YBR226C YBR226C Position: 213 MFE: -21.30 Pairs: 25 MeanMFE: -15.32 StdevMFE: 2.97 zR: -2.01 MeanPairs: 19.81 StdevPairs: 2.87 zP: 1.81 SlipperySite: AAAAAAA StructureSequence: GGCGGCACAATTATTTGGTATATGGCAGCTTTGGCTTTTGCGCCACCACATACAAAGTTCTAAAGCAGCCAGCGTTGT BasePairs: 1 1 1 1 . . 2 2 2 2 2 . . . . . . . . . . . 3 3 3 3 . 3 3 3 3 3 3 3 . 3 3 3 3 3 1 1 1 1 . . . . . . . . 3 3 3 3 3 . . 3 3 3 3 3 3 3 . 3 3 3 3 . . 2 2 2 2 2 FoldingAlgorithm: pknots *************************** 132. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000431 Gene: YBR227C MCX1 Position: 765 MFE: -18.60 Pairs: 26 MeanMFE: -11.88 StdevMFE: 2.69 zR: -2.50 MeanPairs: 20.86 StdevPairs: 3.50 zP: 1.47 SlipperySite: AAAAAAT StructureSequence: ACTACAACAAAGAAGGACGAAGTATTTGTTGTAGACACTTCAAATATTCTTTTCATGATTATGGGAGCTTTTGTTGGTTT BasePairs: . 1 1 1 1 1 1 1 1 1 1 . . . . 1 . . . . . . 1 . 1 1 1 1 1 1 1 1 1 1 2 . 2 2 2 . 2 2 2 2 . . . . . 3 3 3 3 3 3 3 . . . . 3 3 3 3 3 3 3 . . 2 2 2 2 . . 2 2 2 . 2 FoldingAlgorithm: pknots *************************** 133. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000433 Gene: YBR229C ROT2 Position: 2751 MFE: -19.70 Pairs: 30 MeanMFE: -13.33 StdevMFE: 3.03 zR: -2.10 MeanPairs: 20.42 StdevPairs: 3.65 zP: 2.63 SlipperySite: AAAAAAT StructureSequence: GGCGAAGAAAGTTCATTGCCGACTAGATCGTCATATGAGAATGATAATAAGATCACCATTCTTAACCTATCGCTTGACATAACTGAAGATT BasePairs: 1 1 1 1 1 . 1 1 . . . . 1 1 . 1 1 1 1 1 . . . . . 2 2 2 2 . 2 2 2 2 2 2 2 . 2 2 . 2 2 2 2 2 . 2 2 2 2 2 . . . . . . . 2 2 2 2 2 . . . 2 2 2 2 2 . 2 2 . . 2 2 2 2 . . 2 2 2 . 2 2 2 2 FoldingAlgorithm: pknots *************************** 134. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000437 Gene: YBR233W PBP2 Position: 822 MFE: -27.50 Pairs: 22 MeanMFE: -13.60 StdevMFE: 3.12 zR: -4.45 MeanPairs: 18.60 StdevPairs: 3.31 zP: 1.03 SlipperySite: AAATTTA StructureSequence: TCATCTACTTTGTTGAGTATGGCCACACCGCAGTATACTACTGCTAGCGTTGCAAACGCAACGGCCTTTCAACCGAACTTCGTTATC BasePairs: . . . . . . . . . . . 1 1 1 1 1 1 . . . 1 1 1 1 . . . . . 2 2 2 2 2 . . . . . 2 2 2 2 2 . . . . 3 3 3 3 3 . . . . 3 3 3 3 3 1 1 1 1 . 1 1 1 1 1 1 4 4 . . . . . 4 4 . . . . . FoldingAlgorithm: pknots *************************** 135. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000441 Gene: YBR237W PRP5 Position: 84 MFE: -21.90 Pairs: 24 MeanMFE: -11.28 StdevMFE: 2.51 zR: -4.23 MeanPairs: 16.58 StdevPairs: 2.89 zP: 2.57 SlipperySite: AAAAAAA StructureSequence: TTGATGCTCAGAAAGAGCATCAAACTTCACGCAATGACATTGTTACTAACAGTTTAGAAGGTAAGCAGACTACTGAAAAGT BasePairs: 1 1 1 1 1 1 1 1 1 . . . . . 1 1 1 1 1 1 1 1 1 . 2 2 2 2 . . . . . . . . 3 . 3 3 3 3 3 . . . . . 3 3 3 3 3 . 3 . 2 2 2 2 4 4 . . . . . . 4 4 . 5 5 5 . . . . 5 5 5 FoldingAlgorithm: pknots *************************** 136. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000441 Gene: YBR237W PRP5 Position: 645 MFE: -21.70 Pairs: 25 MeanMFE: -11.34 StdevMFE: 2.38 zR: -4.35 MeanPairs: 18.48 StdevPairs: 2.93 zP: 2.22 SlipperySite: AAAAAAT StructureSequence: TTTTATATAGAATCTGAAACAGTTTCCTCGATGTCAGAGATGGAAGTTGAGGAGCTTAGACTTAGTCTGGATAA BasePairs: . . 1 1 1 1 . 1 1 1 1 . 1 1 1 1 1 . . . . . . 2 2 2 2 2 2 2 2 2 . 2 2 2 . . . . 2 2 2 . . 2 2 2 2 2 2 2 2 2 . 1 1 1 1 1 . . . . . 1 1 1 1 . 1 1 1 1 FoldingAlgorithm: pknots *************************** 137. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000441 Gene: YBR237W PRP5 Position: 648 MFE: -20.70 Pairs: 25 MeanMFE: -12.65 StdevMFE: 2.40 zR: -3.35 MeanPairs: 18.88 StdevPairs: 3.36 zP: 1.82 SlipperySite: AAATTTT StructureSequence: GAATCTGAAACAGTTTCCTCGATGTCAGAGATGGAAGTTGAGGAGCTTAGACTTAGTCTGGATAATATCAAAATAAAGGGAAC BasePairs: . . . 1 1 1 1 1 . . . . . . 2 2 2 2 2 2 2 2 2 . 2 2 2 . . . . 2 2 2 . . 2 2 2 2 2 2 2 2 2 . 1 1 1 1 1 3 3 3 . 3 3 . 3 . 3 3 . . . . . 3 3 . 3 . 3 3 . 3 3 3 . . . . . FoldingAlgorithm: pknots *************************** 138. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000443 Gene: YBR239C YBR239C Position: 99 MFE: -30.70 Pairs: 29 MeanMFE: -21.10 StdevMFE: 3.26 zR: -2.94 MeanPairs: 23.91 StdevPairs: 3.23 zP: 1.58 SlipperySite: AAAAAAC StructureSequence: AAACGTGGCATGCGTGAACTGTTCGAGATTGCATGTGTCATGTGAGGCCAAAAGGCCATGCTTACGATGTATCAGCAAGGGCCTCACGGCT BasePairs: . . 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 . 1 1 . . . . . 1 1 . 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 . . 2 2 2 2 . . . 3 3 3 3 3 . 3 3 3 3 . . . . . . . . . . . 3 3 3 3 . . 3 3 3 3 3 . . . 2 2 2 2 FoldingAlgorithm: pknots *************************** 139. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000449 Gene: YBR245C ISW1 Position: 1101 MFE: -23.10 Pairs: 25 MeanMFE: -13.48 StdevMFE: 2.87 zR: -3.35 MeanPairs: 19.31 StdevPairs: 3.16 zP: 1.80 SlipperySite: AAATTTT StructureSequence: CCAGATATCTTTTCCGATGCACAAGATTTCGACGATTGGTTTTCTTCTGAAAGCACAGAGGAAGATCAGGATAAAATTGTC BasePairs: . . . 1 1 . 1 1 1 1 1 . . . . . . . . . . . 1 1 1 1 1 . 1 1 2 2 2 2 . 3 3 3 3 3 3 3 3 3 3 3 3 3 3 . . . . . . 3 3 3 3 3 3 3 3 3 3 3 3 3 3 . . . . . . . . 2 2 2 2 FoldingAlgorithm: pknots *************************** 140. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000449 Gene: YBR245C ISW1 Position: 1395 MFE: -22.20 Pairs: 25 MeanMFE: -16.55 StdevMFE: 3.01 zR: -1.88 MeanPairs: 21.74 StdevPairs: 3.67 zP: 0.89 SlipperySite: TTTAAAT StructureSequence: TGATGCAACTTAGAAAATGTTGTAATCATCCATATTTATTCGATGGTGCTGAGCCAGGTCCACCGTACACTACGGATGAGCACTTGG BasePairs: . . . . . . . . 1 1 1 1 1 . . . . . . . . . . . 2 2 2 2 2 2 . 2 2 . . . . 2 2 . . 2 2 2 2 2 2 . 1 1 1 1 1 3 3 3 3 3 3 . 3 3 3 3 3 3 . . . . . 3 3 3 3 . 3 3 . . . 3 3 3 3 3 3 FoldingAlgorithm: pknots *************************** 141. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000451 Gene: YBR247C ENP1 Position: 894 MFE: -21.70 Pairs: 26 MeanMFE: -13.91 StdevMFE: 2.60 zR: -3.00 MeanPairs: 21.93 StdevPairs: 3.17 zP: 1.28 SlipperySite: TTTAAAC StructureSequence: ATCATATATACCGTGCGGTGAAAAAATCGCTTTATAAACCAAGTGCCTTCTTCAAAGGTTTCCTATTCCCATTGGTTGAAACAGGGTGTA BasePairs: . . . . . . 1 1 1 1 1 1 . 1 2 2 2 2 2 . . . . . . 2 2 2 2 2 3 3 3 . . . 3 3 3 3 3 3 . . 4 4 4 4 4 . . . . . 4 4 4 4 4 . . . . . . . . . . . . 3 3 3 3 3 3 . 3 3 3 . 1 . 1 1 1 1 1 1 FoldingAlgorithm: pknots *************************** 142. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000478 Gene: YBR274W CHK1 Position: 795 MFE: -24.70 Pairs: 27 MeanMFE: -18.19 StdevMFE: 3.15 zR: -2.07 MeanPairs: 25.16 StdevPairs: 3.54 zP: 0.52 SlipperySite: CCCAAAT StructureSequence: AGGGTGACATTGAAGGCTTTAAAGTTACATCCTTGGGTATTACGTCGAGCTTCATTTTCTGGGGATGATGGTCTCTGTAATGACCCTGAA BasePairs: 1 1 1 1 1 . . 1 1 1 1 1 . 1 1 1 1 1 . . . . . . . . . 2 2 2 2 2 2 2 2 2 2 . . 3 3 . . . . . 3 3 . . . . . . . . . 2 2 2 2 2 2 2 2 2 2 . . 1 1 1 1 1 . . . 1 1 1 1 1 1 1 1 1 1 . . . FoldingAlgorithm: pknots *************************** 143. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000479 Gene: YBR275C RIF1 Position: 1800 MFE: -18.40 Pairs: 17 MeanMFE: -13.50 StdevMFE: 2.89 zR: -1.69 MeanPairs: 18.91 StdevPairs: 2.71 zP: -0.71 SlipperySite: CCCTTTT StructureSequence: AATGACGCTTCCTTATGTGAATGATCCAAGCGCTAGAGAAGGGATCATCTACCACCTTTTAGGTGTTGTTTACACTG BasePairs: . . . . . . . . . . . . . . . . 1 1 1 . 1 1 1 1 1 1 1 . . . 2 . . . . . . 2 . . . 1 1 1 1 1 1 1 . 1 1 1 3 3 3 3 . . . . . 3 3 3 3 . 4 4 . . . . 4 4 . . . FoldingAlgorithm: pknots *************************** 144. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000483 Gene: YBR279W PAF1 Position: 648 MFE: -19.40 Pairs: 22 MeanMFE: -14.87 StdevMFE: 2.70 zR: -1.68 MeanPairs: 19.38 StdevPairs: 3.00 zP: 0.87 SlipperySite: TTTAAAT StructureSequence: GAATTTTCAGGCCAGTGGAACTGGAAGAAGACGAATGGATTTCCATGTATGCCACAGATCATAAGGACTCTGCCATTCTG BasePairs: . . . 1 1 1 1 1 . . . 2 2 2 2 . . . . . 2 2 2 2 . . 1 1 1 1 1 . 3 3 3 3 3 3 . . . 4 4 4 . . . 4 4 4 4 . . . . . . . . 4 4 4 4 . 4 4 4 . . . . . 3 3 3 3 3 3 . . FoldingAlgorithm: pknots *************************** 145. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000488 Gene: YBR284W YBR284W Position: 24 MFE: -24.60 Pairs: 25 MeanMFE: -19.49 StdevMFE: 2.99 zR: -1.71 MeanPairs: 22.76 StdevPairs: 2.90 zP: 0.77 SlipperySite: TTTTTTC StructureSequence: TGCGACTCTTATAAGGAGAGCCCTTCCACTTCACCAATACGCTTGGACGACCTGGATGGAAATGACGCTGTGTCGGATCAGGGTTTA BasePairs: . . . . . 1 1 1 1 1 . . . . . 1 1 1 1 1 2 2 2 2 3 3 3 3 . . 3 3 . 3 3 3 3 . . . . . 3 3 3 3 . . 3 3 . . 3 3 3 3 . . 4 4 . . 4 4 4 4 . . . . . 4 4 4 4 . . 4 4 2 2 2 2 . . . . FoldingAlgorithm: pknots *************************** 146. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000488 Gene: YBR284W YBR284W Position: 1809 MFE: -20.10 Pairs: 19 MeanMFE: -14.42 StdevMFE: 2.85 zR: -1.99 MeanPairs: 20.17 StdevPairs: 3.70 zP: -0.32 SlipperySite: TTTAAAC StructureSequence: CTTGCTCGCCTGTGGAGGGTTTCTAAATGCAGAAAATCTCTGGAATGCACCACCATCACTGGTGTATCTTTTCTATCTAAGTCAAA BasePairs: . . 1 1 1 . . . 2 2 . . . . 2 2 2 2 . 2 2 2 2 2 . . . . . . 2 2 2 2 2 . 2 2 2 2 . 2 2 . . . 1 1 1 . 3 3 3 3 3 . . . . 3 3 3 3 3 . . . . . . . . . . . . . . . . . . . . . . FoldingAlgorithm: pknots *************************** 147. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000499 Gene: YBR295W PCA1 Position: 882 MFE: -23.20 Pairs: 27 MeanMFE: -15.65 StdevMFE: 2.64 zR: -2.86 MeanPairs: 23.21 StdevPairs: 3.43 zP: 1.10 SlipperySite: AAATTTA StructureSequence: TTGTATCTGTAACTATTTGCGTACTTTGGGAAAAGAATCTTGTTGTCTCCCAAAGGTGCGTTTTTGTAGCGGGGAGGGTGCTT BasePairs: . . 1 1 1 1 1 1 . 1 . . 1 1 1 1 . . 1 1 1 1 1 1 1 1 1 1 1 1 1 . 1 . 1 1 . . . . . . 1 1 . 1 . 1 1 1 1 1 1 1 . 1 1 1 1 1 1 . . . . 1 1 1 1 . . 1 . . . 1 1 1 1 1 1 . . FoldingAlgorithm: pknots *************************** 148. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000502 Gene: YBR298C MAL31 Position: 390 MFE: -20.80 Pairs: 29 MeanMFE: -15.25 StdevMFE: 2.67 zR: -2.08 MeanPairs: 22.45 StdevPairs: 3.31 zP: 1.98 SlipperySite: AAAAAAA StructureSequence: ATGGTTCTTTGAATAGCAATACAGGAGATTATGAAATTTCAGTTTCCTGGCAAATCGGTCTATGTCTATGCTACATGGCAGGTGAGA BasePairs: 1 1 1 1 . . . . 1 1 1 1 . 1 . 1 1 . . . . 2 2 2 2 2 2 2 2 . . 2 2 2 . . . . 2 2 2 2 2 2 2 2 2 2 2 1 1 . 1 . 1 1 1 1 . 1 1 1 1 . 3 3 3 . 3 3 3 3 . . . . 3 3 3 3 . . . . 3 3 3 FoldingAlgorithm: pknots *************************** 149. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000502 Gene: YBR298C MAL31 Position: 867 MFE: -19.00 Pairs: 25 MeanMFE: -13.05 StdevMFE: 2.60 zR: -2.29 MeanPairs: 17.36 StdevPairs: 3.04 zP: 2.51 SlipperySite: TTTTTTT StructureSequence: GTCTCCATGGTGGCTGGTTAAAAAAGGAAGGATTGATCAAGCGAGGAGATCACTTGAAAGAACATTAAGTGGTAAAGGACCCG BasePairs: 1 1 1 1 1 1 . 1 1 . 1 1 1 . 1 1 1 1 1 . . . . . . . . . . . 1 1 1 1 1 . 1 1 1 . . 1 1 . 1 1 1 1 1 1 . 2 2 2 2 2 2 . . . . . . . 2 2 2 2 2 2 3 3 3 . . . . . 3 3 3 . . FoldingAlgorithm: pknots *************************** 150. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000502 Gene: YBR298C MAL31 Position: 1728 MFE: -25.30 Pairs: 19 MeanMFE: -14.81 StdevMFE: 2.93 zR: -3.58 MeanPairs: 18.38 StdevPairs: 3.08 zP: 0.20 SlipperySite: CCCTTTT StructureSequence: GCAGCTGCCAAAGCAGCAGCTGCAGAAATTAATGTTAAAGATCCGAAGGAAGATTTGGAAACTTCTGTGGTAGATGAAGGGCG BasePairs: 1 1 1 1 1 1 1 1 . . . . . . . 1 1 1 1 1 1 1 1 . . . . . . . . . . . . . . . . . . 2 2 2 2 2 2 . . . . . . 2 2 2 2 2 2 . . 3 3 3 3 . . 3 . . . . 3 . . 3 3 3 3 . . . . FoldingAlgorithm: pknots *************************** 151. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000504 Gene: YBR300C YBR300C Position: 390 MFE: -23.70 Pairs: 24 MeanMFE: -14.03 StdevMFE: 2.98 zR: -3.24 MeanPairs: 18.07 StdevPairs: 3.42 zP: 1.73 SlipperySite: CCCTTTA StructureSequence: GCCTTCAGAGATGCAGCTGCAGCTTTTGGCCAAGAAAAAGCCAAAACCAAATTTGCTTTGAACCCTCGTTAAGAGGCCACCT BasePairs: . . . 1 1 1 1 1 1 1 . 2 2 2 . . . . 2 2 2 3 3 3 3 3 3 . . . . . . . . 3 3 3 3 3 3 4 4 4 4 . . . . . . 4 4 4 4 1 1 1 1 1 1 1 . 5 5 5 5 . . . . . 5 5 5 5 . . . . . . FoldingAlgorithm: pknots *************************** 152. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000506 Gene: YBR302C COS2 Position: 432 MFE: -21.20 Pairs: 27 MeanMFE: -13.28 StdevMFE: 2.89 zR: -2.74 MeanPairs: 19.35 StdevPairs: 3.52 zP: 2.17 SlipperySite: TTTTTTC StructureSequence: TGCCATGGTCTGTCAAGAAGCGTTCAGAACAACCCTTCTCGAACCATTTTCTTTGAAAAAAGATAAAGCTGCCAAGGTTAAGTCAT BasePairs: . 1 1 1 . 1 1 1 2 2 2 . . . . 2 2 2 3 3 3 4 4 4 4 4 4 4 4 . . . . . . 4 4 4 4 . 4 4 4 4 . . 5 5 . 5 5 5 5 5 . . . . 5 5 5 5 5 . 5 5 . 3 3 3 . 1 1 1 . 1 1 1 . . . . . . . . FoldingAlgorithm: pknots *************************** 153. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000514 Gene: YCL008C STP22 Position: 309 MFE: -20.40 Pairs: 21 MeanMFE: -14.77 StdevMFE: 2.69 zR: -2.09 MeanPairs: 18.87 StdevPairs: 3.00 zP: 0.71 SlipperySite: AAATTTC StructureSequence: AACACCATCAGTAGTTCCTTGCCCATTCAAGAATACATCGACTCCAATGGGTGGATTGCGCTGCCCATACTCCACTGCTGGGAT BasePairs: . . . . . . . . 1 1 1 1 . 1 . 1 1 1 . . 1 1 1 1 1 1 1 . . . 2 2 . . . . . 2 2 . . . . . . 1 1 1 1 1 1 1 1 1 1 . 1 . . 1 1 1 1 3 3 3 3 . . . . . . . . . . . 3 3 3 3 . . FoldingAlgorithm: pknots *************************** 154. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000516 Gene: YCL010C SGF29 Position: 90 MFE: -21.10 Pairs: 26 MeanMFE: -11.58 StdevMFE: 2.68 zR: -3.56 MeanPairs: 17.15 StdevPairs: 3.09 zP: 2.86 SlipperySite: AAAAAAA StructureSequence: TTAATATGTCAAAGGATCAGCTGCAATTGCATCTCAACACTTTCCAAGAACACATGGAAAACGTCAACAGAGTGCACCGAATCCTTGACA BasePairs: . . . . . . 1 1 1 1 1 1 . 1 1 1 1 . . 1 . 1 1 1 1 . . . . . . 2 2 2 . . 3 3 . . 3 3 3 3 3 3 . . . . . . . . 3 3 3 3 3 3 . . 3 3 . . . . 2 2 2 . 1 1 1 1 . 1 . . 1 1 1 1 1 1 1 1 1 1 FoldingAlgorithm: pknots *************************** 155. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000516 Gene: YCL010C SGF29 Position: 99 MFE: -21.10 Pairs: 26 MeanMFE: -12.05 StdevMFE: 2.96 zR: -3.06 MeanPairs: 17.00 StdevPairs: 2.98 zP: 3.02 SlipperySite: AAATTTC StructureSequence: TTAATATGTCAAAGGATCAGCTGCAATTGCATCTCAACACTTTCCAAGAACACATGGAAAACGTCAACAGAGTGCACCGAATCCTTGACA BasePairs: . . . . . . 1 1 1 1 1 1 . 1 1 1 1 . . 1 . 1 1 1 1 . . . . . . 2 2 2 . . 3 3 . . 3 3 3 3 3 3 . . . . . . . . 3 3 3 3 3 3 . . 3 3 . . . . 2 2 2 . 1 1 1 1 . 1 . . 1 1 1 1 1 1 1 1 1 1 FoldingAlgorithm: pknots *************************** 156. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000520 Gene: YCL014W BUD3 Position: 1377 MFE: -22.10 Pairs: 24 MeanMFE: -14.85 StdevMFE: 2.88 zR: -2.51 MeanPairs: 20.13 StdevPairs: 3.41 zP: 1.14 SlipperySite: GGGAAAA StructureSequence: TTACAGAATTAGCCAAATGCTGGCCCGTAGAACTGCAATACAAATGGCTGAAGAGAAGGGTAGTCGGTGTGTATGATGTAGTGGAT BasePairs: 1 1 1 1 . . . . . . . 2 2 2 2 . . . . . 2 2 2 2 . . 1 1 1 1 . 3 3 3 3 3 . 3 3 3 3 3 . . 3 3 3 3 3 3 . . . . . . . . . . 3 3 3 3 3 3 . . . 3 3 3 3 3 . . . 3 3 3 3 3 . . . . FoldingAlgorithm: pknots *************************** 157. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000530 Gene: YCL025C AGP1 Position: 1104 MFE: -17.80 Pairs: 18 MeanMFE: -12.98 StdevMFE: 2.88 zR: -1.67 MeanPairs: 16.06 StdevPairs: 2.30 zP: 0.84 SlipperySite: GGGTTTC StructureSequence: TGGTGCCATACAATTCCGATCAATTATTGGGTTCTACCGGTGGTGGTACTAAAGCCTCGCCATATG BasePairs: . 1 1 1 1 . . . . . . . . . 2 2 2 2 2 2 . . . . . 2 2 2 2 2 2 . . . 1 1 1 1 3 3 3 3 3 . 3 3 3 . . . . . . 3 3 3 3 3 3 3 3 . . . . . FoldingAlgorithm: pknots *************************** 158. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000530 Gene: YCL025C AGP1 Position: 1554 MFE: -21.50 Pairs: 26 MeanMFE: -14.34 StdevMFE: 3.11 zR: -2.30 MeanPairs: 20.36 StdevPairs: 3.58 zP: 1.57 SlipperySite: GGGTTTC StructureSequence: ATCTCAAACTGGTGTTTGGGGATCTGCCTACGCTTGCATTATGATGATTTTAATTCTTATTGCCCAATTTTGGGTCGCTATCGCCCCCATT BasePairs: . . . . . 1 1 1 1 . . . . 1 1 1 1 2 2 2 2 3 . . 3 3 3 . . . . . . . . 3 3 3 . 3 4 4 4 4 . 4 4 4 . . . . 4 4 4 . 4 4 4 4 . 5 5 5 5 5 . . . . 5 5 5 5 5 . 6 6 . . . . 6 6 2 2 2 2 . . . FoldingAlgorithm: pknots *************************** 159. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000545 Gene: YCL040W GLK1 Position: 546 MFE: -24.40 Pairs: 22 MeanMFE: -18.11 StdevMFE: 2.77 zR: -2.27 MeanPairs: 21.55 StdevPairs: 3.00 zP: 0.15 SlipperySite: GGGTTTC StructureSequence: GCGGACACCGTCGGAAAGGATGTCGTGCAATTGTACCAGGAGCAATTAAGCGCTCAGGGTATGCCTATGATCAAGGTTGTTG BasePairs: 1 1 1 1 1 1 1 1 1 . . . . . . . . 1 1 . 1 1 1 1 . 1 1 1 . . . 2 2 2 2 2 2 . . 2 2 2 2 . . . . . . . . 2 2 2 2 . . 2 2 2 2 2 2 3 3 3 . . . . . . . 3 3 3 . . . . . . FoldingAlgorithm: pknots *************************** 160. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000552 Gene: YCL047C YCL047C Position: 459 MFE: -19.10 Pairs: 21 MeanMFE: -11.89 StdevMFE: 2.78 zR: -2.59 MeanPairs: 16.03 StdevPairs: 2.95 zP: 1.69 SlipperySite: TTTAAAA StructureSequence: GATGTAATGGAGAGCTTCATGTCGGGATCTCAATTATATTGCTTGGCGAGAGGCGATTGCCAT BasePairs: 1 1 1 1 1 1 1 1 . 1 1 1 1 . . 1 1 1 . . . . . 1 1 1 . 1 1 1 1 . 1 1 1 1 1 1 1 1 . . . 2 2 2 2 2 2 . . . . . . . 2 2 2 2 2 2 . FoldingAlgorithm: pknots *************************** 161. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000569 Gene: YCL064C CHA1 Position: 360 MFE: -19.30 Pairs: 21 MeanMFE: -13.43 StdevMFE: 2.90 zR: -2.02 MeanPairs: 20.75 StdevPairs: 3.42 zP: 0.07 SlipperySite: TTTTTTA StructureSequence: GTCATGAATAAAATAGACTCTCAGGTCATTGAGCCCATTTATGTTCATCCCTTCGATAATCCGGATATTTGGGAAGGACATTCAT BasePairs: 1 1 1 . . . . . . . . . . . . 1 1 1 . 2 2 2 2 2 . . . . 2 2 2 2 2 . . . . . . . 3 3 3 3 3 3 . 3 3 3 3 . 4 4 4 . . . . . . 4 4 4 . . . . . . 3 3 3 3 . 3 3 3 3 3 3 . . . . FoldingAlgorithm: pknots *************************** 162. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000569 Gene: YCL064C CHA1 Position: 363 MFE: -19.30 Pairs: 21 MeanMFE: -13.14 StdevMFE: 2.83 zR: -2.17 MeanPairs: 20.48 StdevPairs: 3.65 zP: 0.14 SlipperySite: TTTAAAA StructureSequence: GTCATGAATAAAATAGACTCTCAGGTCATTGAGCCCATTTATGTTCATCCCTTCGATAATCCGGATATTTGGGAAGGACATTCAT BasePairs: 1 1 1 . . . . . . . . . . . . 1 1 1 . 2 2 2 2 2 . . . . 2 2 2 2 2 . . . . . . . 3 3 3 3 3 3 . 3 3 3 3 . 4 4 4 . . . . . . 4 4 4 . . . . . . 3 3 3 3 . 3 3 3 3 3 3 . . . . FoldingAlgorithm: pknots *************************** 163. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000573 Gene: YCL068C YCL068C Position: 189 MFE: -19.80 Pairs: 14 MeanMFE: -12.28 StdevMFE: 2.56 zR: -2.94 MeanPairs: 12.26 StdevPairs: 2.19 zP: 0.79 SlipperySite: CCCAAAA StructureSequence: CGACAGCATGAGAACGGCCGTACGGCAGTTGCTGGAAGCAACTGCCTGTGT BasePairs: . . 1 1 . 1 1 . 1 . . . . 1 . . 1 1 . 1 1 . . 2 2 2 2 2 2 2 2 2 . . . . . 2 2 2 2 2 2 2 2 2 . . . . . FoldingAlgorithm: pknots *************************** 164. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000573 Gene: YCL068C YCL068C Position: 192 MFE: -19.80 Pairs: 14 MeanMFE: -12.56 StdevMFE: 2.64 zR: -2.74 MeanPairs: 12.24 StdevPairs: 1.98 zP: 0.89 SlipperySite: AAAAAAA StructureSequence: CGACAGCATGAGAACGGCCGTACGGCAGTTGCTGGAAGCAACTGCCTGTGT BasePairs: . . 1 1 . 1 1 . 1 . . . . 1 . . 1 1 . 1 1 . . 2 2 2 2 2 2 2 2 2 . . . . . 2 2 2 2 2 2 2 2 2 . . . . . FoldingAlgorithm: pknots *************************** 165. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000575 Gene: YCL073C YCL073C Position: 963 MFE: -19.70 Pairs: 19 MeanMFE: -12.99 StdevMFE: 3.05 zR: -2.20 MeanPairs: 18.46 StdevPairs: 3.50 zP: 0.15 SlipperySite: TTTTTTA StructureSequence: AGGCCAAATTTGCCAAATCTCCTCTTCTACCGTTCAAATTACTAAGTGATCGTGGAATTTGGGCACCCCTTGGTGTTACTTTT BasePairs: . 1 1 1 . . . . . . . 1 1 1 . . . . . . 2 2 2 . 2 2 2 2 2 2 . . . 3 3 3 . . . . . . . . . . 3 3 3 . . 2 2 2 2 2 2 . . . 2 2 2 4 4 4 4 . . . . 4 4 4 4 . . . . . . . . FoldingAlgorithm: pknots *************************** 166. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000575 Gene: YCL073C YCL073C Position: 1056 MFE: -24.00 Pairs: 23 MeanMFE: -13.77 StdevMFE: 3.01 zR: -3.39 MeanPairs: 20.27 StdevPairs: 3.19 zP: 0.86 SlipperySite: TTTTTTC StructureSequence: TTTTCACCTTTTTCATTTCGTGTGACTATCTGTATCCTGTTTTGCTGGTATCGATGAAAGAATCGTCCACTTCGGCTGCTCGGATAG BasePairs: . . . 1 1 1 1 . . . . . . 2 . . . . . 2 . 1 1 1 1 3 3 3 3 3 3 3 . . . . . . 4 4 . . . 4 4 4 4 4 . . . 5 5 5 5 . . . . . . 5 5 5 5 . . . . . . 4 4 4 4 4 . 4 4 . 3 3 3 3 3 3 3 FoldingAlgorithm: pknots *************************** 167. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000599 Gene: YCR006C YCR006C Position: 342 MFE: -24.50 Pairs: 22 MeanMFE: -14.56 StdevMFE: 3.02 zR: -3.29 MeanPairs: 17.23 StdevPairs: 2.90 zP: 1.64 SlipperySite: TTTTTTC StructureSequence: GCAGAAAAAAAGTGTGACCTTTTCCGTAGCTAGACGTCTATCAGGGCGTCAGCAATGGGAGGCACAGCGGAAAAACAATAACA BasePairs: . . . . . . . . . . . . 1 1 1 1 . 1 1 1 . . 1 1 1 1 1 . 1 1 1 . 1 1 1 1 1 1 1 . . . . 1 1 1 1 1 1 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 . . . . . . . . . . . . . . . . . FoldingAlgorithm: pknots *************************** 168. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000601 Gene: YCR008W SAT4 Position: 1437 MFE: -24.70 Pairs: 28 MeanMFE: -18.04 StdevMFE: 2.92 zR: -2.28 MeanPairs: 22.26 StdevPairs: 2.76 zP: 2.08 SlipperySite: AAAAAAT StructureSequence: CCTTAGTGGAGGCGTTTGCGGTTCATCGCCGTACATCGCCCCAGAGGAATATATCAAAGAAGAGTTTGATCCAAGACCCGTAGATAT BasePairs: 1 1 1 1 . . 1 1 1 . 1 1 1 1 . . 2 2 2 2 2 2 . . . . . 2 2 2 2 2 2 . . . 1 1 1 1 1 1 1 1 1 1 1 . . . 3 3 3 3 3 . 3 . . . . 3 . 3 3 3 3 . . . . . . 3 3 3 3 . 3 . 3 . 3 3 3 3 3 FoldingAlgorithm: pknots *************************** 169. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000607 Gene: YCR014C POL4 Position: 597 MFE: -22.90 Pairs: 26 MeanMFE: -14.84 StdevMFE: 2.41 zR: -3.34 MeanPairs: 21.78 StdevPairs: 3.47 zP: 1.22 SlipperySite: AAAAAAA StructureSequence: ATGAGATCGAAGGTGAGAAATTTCGTGCAAGAAGTTATAGACTGGCTAAACAGTCGATGGAAAATTGCGATTTCAATGTTCGTTCCGGT BasePairs: . 1 1 1 1 1 1 2 2 2 2 2 . 2 . . . . 2 . 2 2 2 2 2 3 3 3 3 3 . . . . 4 4 4 4 . 4 4 4 4 4 . . . . . . 4 4 4 4 4 . 4 4 4 4 . . . . 3 3 3 3 3 1 1 1 1 1 1 . . . . . . . . . . . . . . FoldingAlgorithm: pknots *************************** 170. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000607 Gene: YCR014C POL4 Position: 780 MFE: -21.30 Pairs: 28 MeanMFE: -12.54 StdevMFE: 2.41 zR: -3.64 MeanPairs: 18.81 StdevPairs: 2.67 zP: 3.44 SlipperySite: TTTAAAT StructureSequence: GGGATTAGAAGACAAGTTGAAATACTTCAAAAATTGTTACGGCATTGGGTCGGAAATTGCTAAACGCTGGAATCTTCTAA BasePairs: . . . . 1 1 1 1 1 1 1 1 2 2 2 . 2 2 2 2 2 . . . . 2 2 2 2 2 . . . 2 2 2 3 3 . 3 3 3 3 . 3 3 . 3 3 3 . 3 . . . . 3 . 3 3 3 . 3 3 . 3 3 3 3 . 3 3 1 1 1 1 1 1 1 1 FoldingAlgorithm: pknots *************************** 171. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000612 Gene: YCR019W MAK32 Position: 852 MFE: -22.70 Pairs: 23 MeanMFE: -17.16 StdevMFE: 2.99 zR: -1.86 MeanPairs: 21.82 StdevPairs: 2.79 zP: 0.42 SlipperySite: GGGAAAC StructureSequence: CCTTGGCGGCTTTGCAGTTTCTTATGCCCTAACGAAAAGCTTAGATATTGCTAGTATATGTGGGAACATCGCTGCAGGCGCAA BasePairs: . . . . 1 1 1 1 2 2 2 . . 2 2 2 2 2 . 2 2 2 . . . 2 2 . . . . . . . . . . . 2 2 . . 2 2 2 . 2 2 2 2 2 . 2 2 2 . . 3 3 3 3 . . . . 3 3 3 3 1 1 1 1 4 4 . . . . 4 4 . . FoldingAlgorithm: pknots *************************** 172. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000628 Gene: YCR032W BPH1 Position: 1275 MFE: -18.10 Pairs: 25 MeanMFE: -12.20 StdevMFE: 2.74 zR: -2.15 MeanPairs: 19.36 StdevPairs: 3.31 zP: 1.71 SlipperySite: CCCAAAT StructureSequence: ATATTCTTCAAGATTTCACCGAATCGTCTAATTTTACGGTAAAATTTGAGGAAAGCACGAACTCGAAAAATATTCCGGAAGTGGG BasePairs: . 1 . 1 1 1 1 1 1 1 1 . 1 1 1 1 . 1 1 1 1 . . . . . . . . . . . . . . . 1 1 1 1 . 1 1 1 1 1 1 1 1 1 1 1 1 . 1 2 2 2 . . . 2 2 . 2 2 2 . . . . . 2 2 2 . 2 2 . . 2 2 2 . . FoldingAlgorithm: pknots *************************** 173. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000628 Gene: YCR032W BPH1 Position: 3789 MFE: -17.80 Pairs: 23 MeanMFE: -12.76 StdevMFE: 2.90 zR: -1.74 MeanPairs: 18.96 StdevPairs: 3.62 zP: 1.11 SlipperySite: TTTAAAT StructureSequence: TTTGATTTTTCATCTGAAACATACACTGGAGATACAATCAAATCCAAATTCGTCCTGCAAGTGGTCATCGGACTTTGCAGAAGA BasePairs: 1 1 1 1 1 1 1 . . 1 1 . 1 1 1 . . . . . . . . . . . . 1 1 1 1 1 . . . 1 1 1 1 1 1 1 . . . . . 2 . . . . 2 . 3 3 3 3 3 3 . . 3 3 3 3 . . . . 3 3 3 3 3 3 3 3 3 3 . . . . FoldingAlgorithm: pknots *************************** 174. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000632 Gene: YCR036W RBK1 Position: 150 MFE: -23.20 Pairs: 27 MeanMFE: -13.49 StdevMFE: 3.05 zR: -3.19 MeanPairs: 21.62 StdevPairs: 3.33 zP: 1.62 SlipperySite: AAAAAAC StructureSequence: AGCAGCAGATATAGTGTTCGAATGATTGGTAATGTTGGAAATGATACATTTGGTAAACAATTGAAGGACACTTTATCCGATTGCG BasePairs: . 1 1 1 1 . . 1 1 1 1 . 1 1 1 1 1 1 1 . . . 2 2 2 2 2 2 . . 3 3 3 3 3 . 3 . . . . 3 . . . 3 3 3 3 3 . . . . . . . 2 2 2 2 2 2 . . 1 1 1 1 1 1 1 . 1 1 1 1 . . . 1 1 1 1 . FoldingAlgorithm: pknots *************************** 175. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000633 Gene: YCR037C PHO87 Position: 1056 MFE: -20.66 Pairs: 27 MeanMFE: -13.39 StdevMFE: 3.16 zR: -2.30 MeanPairs: 19.70 StdevPairs: 3.33 zP: 2.19 SlipperySite: TTTAAAC StructureSequence: ATTGCACAACTTATTGAATTTTATGCTGTTCTCATGGGTCAGCCTGGGAACGTAGATTCATGCAAGCAAGAGTTAAAG BasePairs: . 1 1 1 1 1 . 2 2 2 2 2 . . 3 3 3 3 3 3 3 . . . . . 4 4 4 4 4 4 4 4 . 4 4 . . . . . 4 4 4 4 4 4 4 4 4 4 . 3 3 3 3 3 3 3 1 1 1 1 1 . . . . 2 2 2 2 2 . . . . FoldingAlgorithm: pknots *************************** 176. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000634 Gene: YCR038C BUD5 Position: 291 MFE: -19.80 Pairs: 14 MeanMFE: -13.00 StdevMFE: 2.59 zR: -2.62 MeanPairs: 12.81 StdevPairs: 2.03 zP: 0.59 SlipperySite: CCCAAAA StructureSequence: CGACAGCATGAGAACGGCCGTACGGCAGTTGCTGGAAGCAACTGCCTGTGT BasePairs: . . 1 1 . 1 1 . 1 . . . . 1 . . 1 1 . 1 1 . . 2 2 2 2 2 2 2 2 2 . . . . . 2 2 2 2 2 2 2 2 2 . . . . . FoldingAlgorithm: pknots *************************** 177. row *************************** Species: saccharomyces_cerevisiae Accession: SGDID:S0000634 Gene: YCR038C BUD5 Position: 294 MFE: -19.80 Pairs: 14 MeanMFE: -12.13 StdevMFE: 2.51 zR: -3.05 MeanPairs: 11.80 StdevPairs: 1.95 zP: 1.13 SlipperySite: AAAAAAA StructureSequence: CGACAGCATGAGAACGGCCGTACGGCAGTTGCTGGAAGCAACTGCCTGTGT BasePairs: .